LOCUS VTR94406.1 407 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana nadh-ubiquinone plastoquinone oxidoreductase
chain 6 : NADH-ubiquinone/plastoquinone oxidoreductase
chain 6 OS=Planctomyces limnophilus (strain ATCC 43296
/ DSM 3776 / IFAM 1008 / 290) GN=Plim_3866 PE=3 SV=1:
Oxidored_q3 protein.
ACCESSION LR593886-3707
PROTEIN_ID VTR94406.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_33080"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5SX56|D5SX56_PLAL2 ;
ALN/Q_length_ratio=0.400 ;
DESCRIPTION=NADH-ubiquinone/plastoquinone oxidoreductase
chain 6 OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_3866 PE=3 SV=1 ;
EVALUE=1e-15 ; Q/S_length_ratio=1.703"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DCK5|L0DCK5_SINAD ;
ALN/Q_length_ratio=0.388 ; DESCRIPTION=NADH:ubiquinone
oxidoreductase subunit 6 (Chain J) OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_2287 PE=3 SV=1 ; EVALUE=2e-15 ;
Q/S_length_ratio=1.443"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|I0IEM4|I0IEM4_PHYMF ;
ALN/Q_length_ratio=0.332 ; DESCRIPTION=Putative
NADH-quinone oxidoreductase subunit J OS=Phycisphaera
mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01)
GN=nuoJ PE=3 SV=1 ; EVALUE=1e-13 ; Q/S_length_ratio=1.292"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E8QZ71|E8QZ71_ISOPI ;
ALN/Q_length_ratio=0.292 ;
DESCRIPTION=NADH-ubiquinone/plastoquinone oxidoreductase
chain 6 OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=Isop_3643 PE=3 SV=1 ; EVALUE=4e-12 ;
Q/S_length_ratio=1.252"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D2R5G1|D2R5G1_PIRSD ;
ALN/Q_length_ratio=0.329 ;
DESCRIPTION=NADH-ubiquinone/plastoquinone oxidoreductase
chain 6 OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068
/ ICPB 4128) GN=Psta_0734 PE=3 SV=1 ; EVALUE=6e-10 ;
Q/S_length_ratio=1.241"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B9XHI4|B9XHI4_PEDPL ;
ALN/Q_length_ratio=0.270 ;
DESCRIPTION=NADH-ubiquinone/plastoquinone oxidoreductase
chain 6 OS=Pedosphaera parvula (strain Ellin514)
GN=Cflav_PD3677 PE=3 SV=1 ; EVALUE=1e-09 ;
Q/S_length_ratio=2.482"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A017T1R9|A0A017T1R9_9DELT ;
ALN/Q_length_ratio=0.224 ; DESCRIPTION=NADH-ubiquinone
oxidoreductase chain J OS=Chondromyces apiculatus DSM 436
GN=CAP_6530 PE=3 SV=1 ; EVALUE=3e-09 ;
Q/S_length_ratio=2.015"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q1IS41|Q1IS41_KORVE ;
ALN/Q_length_ratio=0.270 ; DESCRIPTION=NADH dehydrogenase
subunit J OS=Koribacter versatilis (strain Ellin345)
GN=Acid345_1307 PE=3 SV=1 ; EVALUE=6e-09 ;
Q/S_length_ratio=2.452"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A9EX75|A9EX75_SORC5 ;
ALN/Q_length_ratio=0.224 ; DESCRIPTION=Putative NADH
dehydrogenase (Ubiquinone) OS=Sorangium cellulosum (strain
So ce56) GN=nuoJ PE=3 SV=1 ; EVALUE=8e-09 ;
Q/S_length_ratio=1.920"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|S4XYM0|S4XYM0_SORCE ;
ALN/Q_length_ratio=0.224 ; DESCRIPTION=Uncharacterized
protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_25615
PE=3 SV=1 ; EVALUE=2e-08 ; Q/S_length_ratio=1.876"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|X0SZY6|X0SZY6_9ZZZZ ;
ALN/Q_length_ratio=0.396 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L01476 (Fragment) OS=marine
sediment metagenome GN=S01H1_06382 PE=4 SV=1 ;
EVALUE=3e-08 ; Q/S_length_ratio=2.056"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L9PDL6|L9PDL6_9BURK ;
ALN/Q_length_ratio=0.285 ; DESCRIPTION=NADH-quinone
oxidoreductase subunit J OS=Janthinobacterium sp. HH01
GN=nuoJ PE=3 SV=1 ; EVALUE=7e-08 ; Q/S_length_ratio=1.947"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A077K386|A0A077K386_LIBAS ;
ALN/Q_length_ratio=0.246 ; DESCRIPTION=NADH dehydrogenase
subunit J OS=Candidatus Liberibacter asiaticus str. Ishi-1
GN=nuoJ PE=3 SV=1 ; EVALUE=2e-07 ; Q/S_length_ratio=2.045"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M4Q3R3|M4Q3R3_LIBAS ;
ALN/Q_length_ratio=0.246 ; DESCRIPTION=NADH dehydrogenase
subunit J OS=Candidatus Liberibacter asiaticus str. gxpsy
GN=WSI_03645 PE=3 SV=1 ; EVALUE=2e-07 ;
Q/S_length_ratio=2.045"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|C6XG32|C6XG32_LIBAP ;
ALN/Q_length_ratio=0.246 ; DESCRIPTION=NADH dehydrogenase
subunit J OS=Liberibacter asiaticus (strain psy62) GN=nuoJ
PE=3 SV=1 ; EVALUE=2e-07 ; Q/S_length_ratio=2.045"
/note="Pfam_scan:hit_1 (82..400);
Pfam:PF00499.15:Oxidored_q3;
Pfam_type:Family;HMM_aln_Length:141; HMM_Length:144;
EVALUE:3e-18; BITSCORE: 65.9"
/note="GO_domain:GO:0044281"
/note="GO_domain:GO:0006091"
/note="GO_domain:GO:0016491"
/note="GO_domain:GO:0051186"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0006810"
/note="Enzyme_Code:EC:1.6.99.5"
/note="Enzyme_Code:EC:1.6.99.3"
/note="Enzyme_Code:EC:1.6.5.3"
BEGIN
1 MNLFALSPTQ EAGGQIALAA VLGVVGFYFL LPRPRGRFVP GGIAALVASA AVFGAWVFAT
61 FGRPLPDVIG TALFVLFSAG ALVFGAVLVA QKNPARGAIA FAFVVLSTCG LFLLLAAPFL
121 MAATIIIYAG AIIVTFLFVL MLSHADGVSD ENDRSREPLY GGFAGFAFVG LVLFTLYQTA
181 QTSKSDGASD SQSHLLAPVV TAEERKILSD VATRLEEAEK TLDGDAGTRG AVLDRLEAFE
241 KVYPPIKNDL SRVVGGTYSP DGTPGRNFQD IELAGNERNG SMHDRLVQFR GQPNGDNSTL
301 FRADEQARGG VKRAASVRET SAKTFRIVRR LMSDEKPDPA GARAAVRELR DEVVLLRGAG
361 ELPANNVRGL GFVLYSEHLL AIELAGTLLL VAVIGAVAVT HRKGVAK
//