LOCUS VTR94395.1 653 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana response regulator sensory box histidine
kinase : PAS domain S-box protein OS=Massilia sp. LC238
GN=FG94_02777 PE=4 SV=1: Response_reg: PAS_3: PAS_9: HisKA:
HATPase_c protein.
ACCESSION LR593886-3696
PROTEIN_ID VTR94395.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_33190"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A085FA04|A0A085FA04_9BURK ;
ALN/Q_length_ratio=0.963 ; DESCRIPTION=PAS domain S-box
protein OS=Massilia sp. LC238 GN=FG94_02777 PE=4 SV=1 ;
EVALUE=1e-104 ; Q/S_length_ratio=0.850"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|K9D6S4|K9D6S4_9BURK ;
ALN/Q_length_ratio=0.943 ; DESCRIPTION=PAS domain S-box
protein OS=Massilia timonae CCUG 45783 GN=HMPREF9710_04781
PE=4 SV=1 ; EVALUE=1e-103 ; Q/S_length_ratio=0.836"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|S9PKK1|S9PKK1_9DELT ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=Chemotaxis protein
methyltransferase CheR OS=Cystobacter fuscus DSM 2262
GN=D187_006392 PE=4 SV=1 ; EVALUE=1e-100 ;
Q/S_length_ratio=0.475"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L7UM30|L7UM30_MYXSD ;
ALN/Q_length_ratio=0.943 ; DESCRIPTION=Response
regulator/sensory box histidine kinase OS=Myxococcus
stipitatus (strain DSM 14675 / JCM 12634 / Mx s8)
GN=MYSTI_07340 PE=4 SV=1 ; EVALUE=3e-99 ;
Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A085VZC5|A0A085VZC5_9DELT ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=Uncharacterized
protein OS=Hyalangium minutum GN=DB31_4701 PE=4 SV=1 ;
EVALUE=1e-97 ; Q/S_length_ratio=0.986"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A085WZ19|A0A085WZ19_9DELT ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=Uncharacterized
protein OS=Enhygromyxa salina GN=DB30_8695 PE=4 SV=1 ;
EVALUE=1e-97 ; Q/S_length_ratio=0.986"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q1CXM2|Q1CXM2_MYXXD ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=Response
regulator/sensory box histidine kinase OS=Myxococcus
xanthus (strain DK 1622) GN=MXAN_6734 PE=4 SV=1 ;
EVALUE=3e-97 ; Q/S_length_ratio=0.973"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q7NGY8|Q7NGY8_GLOVI ;
ALN/Q_length_ratio=0.980 ; DESCRIPTION=Two-component
hybrid sensor and regulator OS=Gloeobacter violaceus
(strain PCC 7421) GN=glr2749 PE=4 SV=1 ; EVALUE=7e-96 ;
Q/S_length_ratio=0.504"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|U2TY97|U2TY97_9DELT ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=Uncharacterized
protein OS=Myxococcus sp. (contaminant ex DSM 436)
GN=A176_01849 PE=4 SV=1 ; EVALUE=7e-95 ;
Q/S_length_ratio=0.989"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A085EYK4|A0A085EYK4_9BURK ;
ALN/Q_length_ratio=0.781 ; DESCRIPTION=PAS domain S-box
protein OS=Massilia sp. LC238 GN=FG94_04052 PE=4 SV=1 ;
EVALUE=5e-93 ; Q/S_length_ratio=0.798"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|W0VAE6|W0VAE6_9BURK ;
ALN/Q_length_ratio=0.779 ; DESCRIPTION=Sensory box protein
OS=Janthinobacterium agaricidamnosum NBRC 102515 = DSM
9628 GN=GJA_4246 PE=4 SV=1 ; EVALUE=7e-93 ;
Q/S_length_ratio=0.728"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F8C8W6|F8C8W6_MYXFH ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=Response
regulator/sensory box histidine kinase OS=Myxococcus
fulvus (strain ATCC BAA-855 / HW-1) GN=LILAB_12795 PE=4
SV=1 ; EVALUE=3e-92 ; Q/S_length_ratio=0.989"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|J7Q4Y4|J7Q4Y4_METSZ ;
ALN/Q_length_ratio=0.764 ; DESCRIPTION=Histidine kinase
OS=Methylocystis sp. (strain SC2) GN=BN69_2708 PE=4 SV=1 ;
EVALUE=5e-90 ; Q/S_length_ratio=0.579"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D0LSE4|D0LSE4_HALO1 ;
ALN/Q_length_ratio=0.936 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Haliangium ochraceum (strain
DSM 14365 / JCM 11303 / SMP-2) GN=Hoch_3141 PE=4 SV=1 ;
EVALUE=2e-89 ; Q/S_length_ratio=0.464"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|C1A732|C1A732_GEMAT ;
ALN/Q_length_ratio=0.770 ; DESCRIPTION=Putative
two-component hybrid sensor and regulator OS=Gemmatimonas
aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC
100505) GN=GAU_1000 PE=4 SV=1 ; EVALUE=4e-89 ;
Q/S_length_ratio=0.650"
/note="Pfam_scan:hit_1 (20..133);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:110; HMM_Length:112;
EVALUE:3.8e-23; BITSCORE: 81.6"
/note="Pfam_scan:hit_2 (184..270); Pfam:PF08447.6:PAS_3;
Pfam_type:Domain;HMM_aln_Length:70; HMM_Length:91;
EVALUE:2.6e-09; BITSCORE: 37.0"
/note="Pfam_scan:hit_3 (305..408); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:96; HMM_Length:104;
EVALUE:1.2e-14; BITSCORE: 54.5"
/note="Pfam_scan:hit_4 (422..488); Pfam:PF00512.20:HisKA;
Pfam_type:Domain;HMM_aln_Length:65; HMM_Length:68;
EVALUE:2.5e-13; BITSCORE: 49.7"
/note="Pfam_scan:hit_5 (534..646);
Pfam:PF02518.21:HATPase_c;
Pfam_type:Domain;HMM_aln_Length:108; HMM_Length:111;
EVALUE:1.3e-25; BITSCORE: 89.2"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MLANTKEGWQ LSREVGRVDI LVVDDEPANL LALEAVLADL GQNIIRAGSG DEALRRVLET
61 DFAVIIMDLR MPGLSGFEAA QLIRTRSRSR STPIIFLTAA DGDGFSATEA YALGAVDYLT
121 KPLVPMILRA KVAVFVELYQ KTEALKAAER ERAAVAVQES EERLKLAVDI ARMGTFDIDL
181 LTDVVVMNEP GRVLLGFAST QTTFARVQER FHPDDRDGVM SRVLAAFEPT GSGNFELEHR
241 ILRPSGEERW LRVRGQTFFT GAGSARKAVR CLGAFLDVTE AKRSEEALRA SEEEFRTNFE
301 RAGVGKAHAD PTTGQLVRVN AAFCTLMGYT TDELLKLTIR EVTHPDERDA SDERFGALMR
361 GTVPQYAVEK RYVRKDGATI WVRVTATVVR TPAGVPIRAC AIIEDITARK RAEAALAEES
421 RRKDEFLAIL AHELRNPLAP ISNGLELLKM YPAGGPAAEK ARTRMDRQLA HLIRLIDDLM
481 DISRVSRGKL ELRKDRVTVR MVVENALDAS APLLESAGHQ ISVTIPSEPL VLHADAVRIT
541 QIVSNLLNNA AKYTPPGGCV GLAVEREGGT AVIRISDSGV GLEADMLPKV FEMFTQVGKT
601 LDRAQGGLGI GLALVKRLVE MHGGAISAES PGLGHGSTFT VKLPLAESTR TLP
//