LOCUS VTR94316.1 516 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Putative uncharacterized protein OS=
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
GN=amb1929 PE=4 SV=1: Prim-Pol: Replicase protein.
ACCESSION LR593886-3617
PROTEIN_ID VTR94316.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_33980"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|Q2W5Z2|Q2W5Z2_MAGSA ;
ALN/Q_length_ratio=0.378 ; DESCRIPTION=Putative
uncharacterized protein OS=Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264) GN=amb1929 PE=4 SV=1 ;
EVALUE=6e-18 ; Q/S_length_ratio=1.100"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|I1D4C2|I1D4C2_9PSEU ;
ALN/Q_length_ratio=0.436 ; DESCRIPTION=Bifunctional DNA
primase/polymerase famiily protein OS=Saccharomonospora
glauca K62 GN=SacglDRAFT_02914 PE=4 SV=1 ; EVALUE=1e-17 ;
Q/S_length_ratio=1.767"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E3GF56|E3GF56_EUBLK ;
ALN/Q_length_ratio=0.403 ; DESCRIPTION=Uncharacterized
protein OS=Eubacterium limosum (strain KIST612)
GN=ELI_3221 PE=4 SV=1 ; EVALUE=3e-17 ;
Q/S_length_ratio=0.578"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|F8JA33|F8JA33_HYPSM ;
ALN/Q_length_ratio=0.316 ; DESCRIPTION=Uncharacterized
protein OS=Hyphomicrobium sp. (strain MC1) GN=HYPMC_4245
PE=4 SV=1 ; EVALUE=7e-17 ; Q/S_length_ratio=0.761"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|W8ANM5|W8ANM5_9NOCA ;
ALN/Q_length_ratio=0.440 ; DESCRIPTION=Bifunctional DNA
primase/polymerase family protein OS=Nocardia seriolae
N-2927 GN=NS07_contig00211-0008 PE=4 SV=1 ; EVALUE=1e-16 ;
Q/S_length_ratio=1.823"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D6STR7|D6STR7_9DELT ;
ALN/Q_length_ratio=0.419 ; DESCRIPTION=Bifunctional DNA
primase/polymerase OS=Desulfonatronospira thiodismutans
ASO3-1 GN=Dthio_PD1423 PE=4 SV=1 ; EVALUE=2e-16 ;
Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|B0UEH7|B0UEH7_METS4 ;
ALN/Q_length_ratio=0.388 ; DESCRIPTION=Bifunctional DNA
primase/polymerase OS=Methylobacterium sp. (strain 4-46)
GN=M446_1167 PE=4 SV=1 ; EVALUE=2e-16 ;
Q/S_length_ratio=1.785"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|C9R7L2|C9R7L2_AMMDK ;
ALN/Q_length_ratio=0.298 ; DESCRIPTION=Bifunctional DNA
primase/polymerase OS=Ammonifex degensii (strain DSM 10501
/ KC4) GN=Adeg_1177 PE=4 SV=1 ; EVALUE=2e-16 ;
Q/S_length_ratio=1.823"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|H6R9X9|H6R9X9_NOCCG ;
ALN/Q_length_ratio=0.316 ; DESCRIPTION=Uncharacterized
protein OS=Nocardia cyriacigeorgica (strain GUH-2)
GN=NOCYR_0367 PE=4 SV=1 ; EVALUE=3e-15 ;
Q/S_length_ratio=1.883"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A099D385|A0A099D385_9ACTO ;
ALN/Q_length_ratio=0.444 ; DESCRIPTION=Uncharacterized
protein OS=Actinopolyspora erythraea GN=IL38_15970 PE=4
SV=1 ; EVALUE=4e-15 ; Q/S_length_ratio=1.804"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|C6WCZ7|C6WCZ7_ACTMD ;
ALN/Q_length_ratio=0.304 ; DESCRIPTION=Bifunctional DNA
primase/polymerase OS=Actinosynnema mirum (strain ATCC
29888 / DSM 43827 / NBRC 14064 / IMRU 3971) GN=Amir_3733
PE=4 SV=1 ; EVALUE=1e-14 ; Q/S_length_ratio=1.904"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|H8GEU7|H8GEU7_9PSEU ;
ALN/Q_length_ratio=0.463 ; DESCRIPTION=Bifunctional DNA
primase/polymerase famiily protein OS=Saccharomonospora
azurea NA-128 GN=SacazDRAFT_03127 PE=4 SV=1 ; EVALUE=2e-14
; Q/S_length_ratio=1.773"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|H6R947|H6R947_NOCCG ;
ALN/Q_length_ratio=0.448 ; DESCRIPTION=Uncharacterized
protein OS=Nocardia cyriacigeorgica (strain GUH-2)
GN=NOCYR_2853 PE=4 SV=1 ; EVALUE=3e-14 ;
Q/S_length_ratio=1.726"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D2PTG3|D2PTG3_KRIFD ;
ALN/Q_length_ratio=0.448 ; DESCRIPTION=Bifunctional DNA
primase/polymerase OS=Kribbella flavida (strain DSM 17836
/ JCM 10339 / NBRC 14399) GN=Kfla_2197 PE=4 SV=1 ;
EVALUE=4e-14 ; Q/S_length_ratio=1.675"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D1NQR9|D1NQR9_CLOTM ;
ALN/Q_length_ratio=0.444 ; DESCRIPTION=Bifunctional DNA
primase/polymerase OS=Ruminiclostridium thermocellum JW20
GN=Cther_0228 PE=4 SV=1 ; EVALUE=4e-14 ;
Q/S_length_ratio=1.925"
/note="Pfam_scan:hit_1 (9..174); Pfam:PF09250.6:Prim-Pol;
Pfam_type:Domain;HMM_aln_Length:161; HMM_Length:163;
EVALUE:2.1e-34; BITSCORE: 118.8"
/note="Pfam_scan:hit_2 (46..134);
Pfam:PF03090.12:Replicase;
Pfam_type:Family;HMM_aln_Length:54; HMM_Length:137;
EVALUE:0.00012; BITSCORE: 21.9"
BEGIN
1 MSDTLLDRAL TLARKGFRVF PCGKRGKSPV FKNPFQRATT NETTINKWWG RRYKNCNIGL
61 HLTGVLVVDI DGPEGQASYA RLAQGRPFPA THSVSTSNGG KHLFYRLPDG LRAIPGALCR
121 RKGQKQYAAY TKIDIKGTGG IIIGAGSVHK SGGIYAWDNE PAHVNDFAPA PQWMVHDLCE
181 PERPEYLVEL HAEESASDPD AELLAVLCER FAISPGTRNT TVAQAAAWML GRGVTRARAK
241 QVGASYLRMQ GRDYDEAHAH LERTIDELFD KLASGDESVY LMDDHEKTAC DYYQAHTRQG
301 RTLNRFSVLP LCDVVLSDNE YCFLQAVDAF LLYEIEVVGK QVGAMPMTYN QLKAIYKLLH
361 GRSLCIDTMY KMLGKFVSRE GKPASKWEVM VQMVVGHIGV PSVYEVKRVS HVASAVVSEA
421 PSHFVGGEVL EVVGDELPVE SLPEVVVGSG AGVVLGVQAP RWGAQVGVAT QPDAVGGVGE
481 DHVCQGRVSA DAGGQAGGIA DDPAILKLMD ILDDED
//