LOCUS VTR94313.1 579 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna polymerase i : DNA polymerase,
putative OS=Pelobacter carbinolicus (strain DSM 2380 /
Gra Bd 1) GN=Pcar_0797 PE=4 SV=1: DNA_pol_A protein.
ACCESSION LR593886-3614
PROTEIN_ID VTR94313.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_34010"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|Q3A6F3|Q3A6F3_PELCD ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=DNA polymerase,
putative OS=Pelobacter carbinolicus (strain DSM 2380 / Gra
Bd 1) GN=Pcar_0797 PE=4 SV=1 ; EVALUE=3e-74 ;
Q/S_length_ratio=0.976"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|H8MFB3|H8MFB3_CORCM ;
ALN/Q_length_ratio=0.941 ; DESCRIPTION=DNA polymerase I,
thermostable OS=Corallococcus coralloides (strain ATCC
25202 / DSM 2259 / NBRC 100086 / M2) GN=polA1 PE=4 SV=1 ;
EVALUE=3e-67 ; Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5RTU0|M5RTU0_9PLAN ;
ALN/Q_length_ratio=0.869 ; DESCRIPTION=DNA polymerase I
OS=Rhodopirellula maiorica SM1 GN=RMSM_05693 PE=4 SV=1 ;
EVALUE=1e-66 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5TZL8|M5TZL8_9PLAN ;
ALN/Q_length_ratio=0.864 ; DESCRIPTION=DNA polymerase I
OS=Rhodopirellula sallentina SM41 GN=RSSM_03914 PE=4 SV=1
; EVALUE=7e-66 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D5BU16|D5BU16_PUNMI ;
ALN/Q_length_ratio=0.686 ; DESCRIPTION=DNA polymerase
I-3'-5' exonuclease and polymerase domains
OS=Puniceispirillum marinum (strain IMCC1322)
GN=SAR116_1520 PE=4 SV=1 ; EVALUE=7e-65 ;
Q/S_length_ratio=1.385"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|H8Z1K1|H8Z1K1_9GAMM ;
ALN/Q_length_ratio=0.879 ; DESCRIPTION=DNA polymerase I
family protein with 3'-5'-exonuclease and polymerase
domains OS=Thiorhodovibrio sp. 970 GN=Thi970DRAFT_01654
PE=4 SV=1 ; EVALUE=6e-64 ; Q/S_length_ratio=0.981"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A0A5DBR8|A0A0A5DBR8_BURPE ;
ALN/Q_length_ratio=0.943 ; DESCRIPTION=DNA polymerase A
family protein OS=Burkholderia pseudomallei TSV44
GN=Y024_5453 PE=4 SV=1 ; EVALUE=1e-62 ;
Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A096EI81|A0A096EI81_COMTE ;
ALN/Q_length_ratio=0.679 ; DESCRIPTION=Uncharacterized
protein OS=Comamonas testosteroni GN=P606_24175 PE=4 SV=1
; EVALUE=1e-62 ; Q/S_length_ratio=1.402"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A076K7I9|A0A076K7I9_9RHOB ;
ALN/Q_length_ratio=0.895 ; DESCRIPTION=DNA polymerase
OS=Planktomarina temperata RCA23 GN=RCA23_c26770 PE=3 SV=1
; EVALUE=1e-61 ; Q/S_length_ratio=1.072"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5RK08|M5RK08_9PLAN ;
ALN/Q_length_ratio=0.869 ; DESCRIPTION=DNA polymerase I
OS=Rhodopirellula maiorica SM1 GN=RMSM_03562 PE=4 SV=1 ;
EVALUE=2e-61 ; Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M7TCB3|M7TCB3_9EURY ;
ALN/Q_length_ratio=0.679 ; DESCRIPTION=DNA polymerase I
family protein (Fragment) OS=Thermoplasmatales archaeon
SCGC AB-539-N05 GN=MBGDN05_00687 PE=4 SV=1 ; EVALUE=1e-53
; Q/S_length_ratio=1.385"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A059U0E4|A0A059U0E4_9BACT ;
ALN/Q_length_ratio=0.813 ; DESCRIPTION=DNA polymerase I
OS=uncultured bacterium PE=3 SV=1 ; EVALUE=2e-53 ;
Q/S_length_ratio=1.066"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|X1HMM7|X1HMM7_9ZZZZ ;
ALN/Q_length_ratio=0.641 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S03H2_L01218 (Fragment) OS=marine
sediment metagenome GN=S03H2_12340 PE=4 SV=1 ;
EVALUE=1e-38 ; Q/S_length_ratio=1.470"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|X1HVG4|X1HVG4_9ZZZZ ;
ALN/Q_length_ratio=0.432 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S03H2_S03777 (Fragment) OS=marine
sediment metagenome GN=S03H2_33222 PE=4 SV=1 ;
EVALUE=3e-27 ; Q/S_length_ratio=2.083"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|C2MBR8|C2MBR8_9PORP ;
ALN/Q_length_ratio=0.872 ; DESCRIPTION=DNA-directed DNA
polymerase OS=Porphyromonas uenonis 60-3 GN=polA PE=3 SV=1
; EVALUE=2e-19 ; Q/S_length_ratio=0.611"
/note="Pfam_scan:hit_1 (258..538);
Pfam:PF00476.15:DNA_pol_A;
Pfam_type:Family;HMM_aln_Length:208; HMM_Length:383;
EVALUE:7.1e-12; BITSCORE: 44.6"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0016779"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0005622"
/note="Enzyme_Code:EC:2.7.7.7"
BEGIN
1 MPTSDPVIVI DSEWGYTDRR IGCESAFMPV VLCAQVLGGE CHVFWARDRH RLAEFLVRYR
61 DAYWVAHSAT AEMKYLLRVG LQPPEKWWDT MVGYRVAANR SGYLSAALVD ALGASGLADL
121 IPPNKNEMRE AILNLQFAPE DEPAIAEYCM ADVRATAALY ARLVDRLDPA TMQHWCEYLR
181 AVARMELRGI PIDTAALVRI WNGREHIAEA LRDKLNRTAR VYRHDGTFDC GAFFGWLRAQ
241 KIAWPQSLGK NGWYDPLDDD TLEAMEKRHP FIEELRQTRK SLRSIMDHVM LVDGVTRRHY
301 YSTMPFRSVT GRNQPSQFIF SGPKWLRWLI TPASPDHVLV YADFAAEEIG IAAALSGDEA
361 MQSMYAADDP HLAFAVRAGA APATATKDTH GDIRDQYKTV NLAVLYAQTP YGIADRLGID
421 LYESKLLLRQ HESLFRKYHE WSKRVVATAV QRRTIHTRCG WKAHVEPGTK WRTWANFPVQ
481 AGAADVMRVM TLVLDRQNVQ ILAIVHDGWL LSCRKGQLEQ LRAAVGHARR VTCDTLLNGF
541 QLKLDIAVYR DCFEDKKGKK AWDFIRSVLP RELPEIEPA
//