LOCUS VTR94309.1 649 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana recombinase : Resolvase domain protein
OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM
5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_0993
PE=4 SV=1: Resolvase: Recombinase: Zn_ribbon_recom protein.
ACCESSION LR593886-3610
PROTEIN_ID VTR94309.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_34050"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|F0SJ72|F0SJ72_PLABD ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Resolvase domain
protein OS=Planctomyces brasiliensis (strain ATCC 49424 /
DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
GN=Plabr_0993 PE=4 SV=1 ; EVALUE=1e-69 ;
Q/S_length_ratio=0.959"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D2R2T0|D2R2T0_PIRSD ;
ALN/Q_length_ratio=0.602 ; DESCRIPTION=Recombinase
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=Psta_2249 PE=4 SV=1 ; EVALUE=9e-24 ;
Q/S_length_ratio=0.938"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|X1JV04|X1JV04_9ZZZZ ;
ALN/Q_length_ratio=0.414 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S03H2_S09617 (Fragment) OS=marine
sediment metagenome GN=S03H2_41901 PE=4 SV=1 ;
EVALUE=2e-13 ; Q/S_length_ratio=2.377"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5S6W3|M5S6W3_9PLAN ;
ALN/Q_length_ratio=0.242 ; DESCRIPTION=Resolvase protein
(Fragment) OS=Rhodopirellula maiorica SM1 GN=RMSM_01145
PE=4 SV=1 ; EVALUE=7e-13 ; Q/S_length_ratio=3.452"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|B1FTH9|B1FTH9_9BURK ;
ALN/Q_length_ratio=0.413 ; DESCRIPTION=Recombinase
OS=Burkholderia graminis C4D1M GN=BgramDRAFT_0305 PE=4
SV=1 ; EVALUE=1e-12 ; Q/S_length_ratio=1.227"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|E0P0Z1|E0P0Z1_9FIRM ;
ALN/Q_length_ratio=0.247 ; DESCRIPTION=Resolvase,
N-terminal domain protein OS=Selenomonas sp. oral taxon
149 str. 67H29BP GN=HMPREF9166_1758 PE=4 SV=1 ;
EVALUE=4e-09 ; Q/S_length_ratio=3.261"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|V7F7K6|V7F7K6_9RHIZ ;
ALN/Q_length_ratio=0.404 ; DESCRIPTION=Uncharacterized
protein OS=Mesorhizobium sp. LSHC420B00 GN=X759_35765 PE=4
SV=1 ; EVALUE=4e-09 ; Q/S_length_ratio=1.390"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|G1VS31|G1VS31_9FIRM ;
ALN/Q_length_ratio=0.465 ; DESCRIPTION=Uncharacterized
protein OS=Erysipelotrichaceae bacterium 2_2_44A
GN=HMPREF9022_02821 PE=4 SV=1 ; EVALUE=3e-08 ;
Q/S_length_ratio=1.260"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A099I3U1|A0A099I3U1_CLOIN ;
ALN/Q_length_ratio=0.496 ; DESCRIPTION=Recombinase
OS=Clostridium innocuum GN=CIAN88_15535 PE=4 SV=1 ;
EVALUE=3e-08 ; Q/S_length_ratio=1.260"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A016NSM6|A0A016NSM6_BACFG ;
ALN/Q_length_ratio=0.233 ; DESCRIPTION=Resolvase, N
terminal domain protein (Fragment) OS=Bacteroides fragilis
str. I1345 GN=M066_4650 PE=4 SV=1 ; EVALUE=5e-08 ;
Q/S_length_ratio=4.160"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A016NTL5|A0A016NTL5_BACFG ;
ALN/Q_length_ratio=0.233 ; DESCRIPTION=Resolvase, N
terminal domain protein (Fragment) OS=Bacteroides fragilis
str. I1345 GN=M066_4622 PE=4 SV=1 ; EVALUE=7e-08 ;
Q/S_length_ratio=3.886"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|N9WWH7|N9WWH7_CLOIN ;
ALN/Q_length_ratio=0.465 ; DESCRIPTION=Uncharacterized
protein OS=[Clostridium] innocuum 2959 GN=HMPREF1094_00247
PE=4 SV=1 ; EVALUE=8e-08 ; Q/S_length_ratio=1.260"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D1JTR4|D1JTR4_9BACE ;
ALN/Q_length_ratio=0.233 ; DESCRIPTION=Resolvase,
N-terminal domain protein OS=Bacteroides sp. 2_1_16
GN=HMPREF0101_03365 PE=4 SV=1 ; EVALUE=1e-07 ;
Q/S_length_ratio=3.294"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A017NX70|A0A017NX70_BACFG ;
ALN/Q_length_ratio=0.233 ; DESCRIPTION=Resolvase, N
terminal domain protein OS=Bacteroides fragilis str. S6R8
GN=M131_2847 PE=4 SV=1 ; EVALUE=1e-07 ;
Q/S_length_ratio=3.294"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q64SL4|Q64SL4_BACFR ;
ALN/Q_length_ratio=0.233 ; DESCRIPTION=Serinr type
site-specific recombinase Mpi OS=Bacteroides fragilis
(strain YCH46) GN=BF2765 PE=4 SV=1 ; EVALUE=1e-07 ;
Q/S_length_ratio=3.294"
/note="Pfam_scan:hit_1 (12..157);
Pfam:PF00239.16:Resolvase;
Pfam_type:Domain;HMM_aln_Length:138; HMM_Length:141;
EVALUE:5.8e-15; BITSCORE: 55.3"
/note="Pfam_scan:hit_2 (224..348);
Pfam:PF07508.8:Recombinase;
Pfam_type:Family;HMM_aln_Length:99; HMM_Length:102;
EVALUE:8.2e-12; BITSCORE: 45.2"
/note="Pfam_scan:hit_3 (361..425);
Pfam:PF13408.1:Zn_ribbon_recom;
Pfam_type:Domain;HMM_aln_Length:53; HMM_Length:58;
EVALUE:2.2e-07; BITSCORE: 31.0"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MTTPSAPHGS RGVAYLRISG DKQDTATQKA NIQRWLARHG LQVECWYEDV GSRDLAYKRR
61 EFQLMMSRVA TGCLDWIIVD SMDRFGVRDH YEFGKFACDL RDNDCELWST TEGHLTGDDL
121 ATGVVGAVKS ARSQDEQAAR GKRAVEGLIE AVKNGKTPGG YPPYGYDYMC VGEDGKEKWR
181 LRYLGHYKRV KINPDGTEQA YDGKKNFPAR DQGDSLVLVP ARDPKQVEAV KLIFRWFATE
241 SISYGGIAKR LGDLGYSPIY AETWYTDRVI RILRNPAALV GRTVSNKQSQ GRFCEFRGGQ
301 IEAVKRKGGR AVSYRVHTQA DHIYPDQWGE GLIDRDTWDT VQAKIAHKPK QCRSAKSPEL
361 WLAEFLYCSM CGRKMAGWAQ PNHKADPYSY VCSSFRQFGE RNKNGCRMHR VKHSEITPLV
421 EKWLADTQQK LAEVLDAEPD LTEFEKRADR TQQDYCRLIT AVWRTMKKWG VPNPEGGVWA
481 APSLAEAFRQ HAPTHQSKER AALKALQMKY EQATESYLEL PQRAREVVRA KLEVLEADIA
541 ALEERLRPMD EKLSELRTEM VAAAGRVRAA GEACRGQNQR AKAQALSRVL ARIVCSFEHY
601 QSQPKKKQTK RQKARPQGQD RSRLVSAFFE PLLGEGRELR AEGGASAQR
//