LOCUS VTR94280.1 803 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna helicase : RecD/TraA-family helicase
OS=Octadecabacter antarcticus 307 GN=OAN307_c08020 PE=
4 SV=1: HHH_4: AAA_30: UvrD_C_2 protein.
ACCESSION LR593886-3581
PROTEIN_ID VTR94280.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_34340"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|W9H1I6|W9H1I6_9PROT ;
ALN/Q_length_ratio=0.887 ; DESCRIPTION=ATPase AAA
OS=Skermanella stibiiresistens SB22 GN=N825_03455 PE=4
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.078"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A3YYE8|A3YYE8_9SYNE ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=Helicase RecD/TraA
OS=Synechococcus sp. WH 5701 GN=WH5701_08609 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.058"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|C7KIH7|C7KIH7_ACEPA ;
ALN/Q_length_ratio=0.883 ; DESCRIPTION=DNA helicase
RecD/TraA OS=Acetobacter pasteurianus IFO 3283-26 GN=recD
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.087"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A070A546|A0A070A546_9PROT ;
ALN/Q_length_ratio=0.883 ; DESCRIPTION=Recombinase RecD
OS=Gluconacetobacter rhaeticus AF1 GN=GLUCORHAEAF1_07495
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|B5ZFX4|B5ZFX4_GLUDA ;
ALN/Q_length_ratio=0.883 ; DESCRIPTION=Helicase, RecD/TraA
family OS=Gluconacetobacter diazotrophicus (strain ATCC
49037 / DSM 5601 / PAl5) GN=Gdia_0993 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|C7JS91|C7JS91_ACEPA ;
ALN/Q_length_ratio=0.883 ; DESCRIPTION=DNA helicase
RecD/TraA OS=Acetobacter pasteurianus IFO 3283-03 GN=recD
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.087"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A9HC74|A9HC74_GLUDA ;
ALN/Q_length_ratio=0.883 ; DESCRIPTION=Putative
exodeoxyribonuclease V alpha chain OS=Gluconacetobacter
diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)
GN=recD PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|C7L9F3|C7L9F3_ACEPA ;
ALN/Q_length_ratio=0.883 ; DESCRIPTION=DNA helicase
RecD/TraA OS=Acetobacter pasteurianus IFO 3283-12 GN=recD
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.087"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|C7KS73|C7KS73_ACEPA ;
ALN/Q_length_ratio=0.883 ; DESCRIPTION=DNA helicase
RecD/TraA OS=Acetobacter pasteurianus IFO 3283-32 GN=recD
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.087"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|C7K131|C7K131_ACEPA ;
ALN/Q_length_ratio=0.883 ; DESCRIPTION=DNA helicase
RecD/TraA OS=Acetobacter pasteurianus IFO 3283-07 GN=recD
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.087"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|B4S9Y7|B4S9Y7_PELPB ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=Helicase, RecD/TraA
family OS=Pelodictyon phaeoclathratiforme (strain DSM 5477
/ BU-1) GN=Ppha_1425 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.090"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|C7K9S9|C7K9S9_ACEPA ;
ALN/Q_length_ratio=0.883 ; DESCRIPTION=DNA helicase
RecD/TraA OS=Acetobacter pasteurianus IFO 3283-22 GN=recD
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.087"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|C7JIN6|C7JIN6_ACEP3 ;
ALN/Q_length_ratio=0.883 ; DESCRIPTION=DNA helicase
RecD/TraA OS=Acetobacter pasteurianus (strain NBRC 3283 /
LMG 1513 / CCTM 1153) GN=recD PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.087"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|W5YBZ7|W5YBZ7_KOMXY ;
ALN/Q_length_ratio=0.883 ; DESCRIPTION=Helicase, RecD/TraA
family OS=Gluconacetobacter xylinus E25 GN=H845_2454 PE=4
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|M9R2S3|M9R2S3_9RHOB ;
ALN/Q_length_ratio=0.884 ; DESCRIPTION=RecD/TraA-family
helicase OS=Octadecabacter antarcticus 307
GN=OAN307_c08020 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.102"
/note="Pfam_scan:hit_1 (138..231); Pfam:PF14490.1:HHH_4;
Pfam_type:Family;HMM_aln_Length:92; HMM_Length:94;
EVALUE:2.1e-31; BITSCORE: 107.5"
/note="Pfam_scan:hit_2 (403..587); Pfam:PF13604.1:AAA_30;
Pfam_type:Domain;HMM_aln_Length:177; HMM_Length:196;
EVALUE:1.3e-43; BITSCORE: 148.8"
/note="Pfam_scan:hit_3 (669..773);
Pfam:PF13538.1:UvrD_C_2;
Pfam_type:Domain;HMM_aln_Length:102; HMM_Length:104;
EVALUE:5.4e-26; BITSCORE: 90.7"
/note="GO_domain:GO:0016887"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0051276"
/note="GO_domain:GO:0004518"
/note="GO_domain:GO:0034655"
/note="GO_domain:GO:0004386"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005694"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0006950"
/note="Enzyme_Code:EC:3.6.1"
/note="Enzyme_Code:EC:3.6.1.3"
/note="Enzyme_Code:EC:3.1"
/note="Enzyme_Code:EC:3.1.11"
/note="Enzyme_Code:EC:3.1.15"
/note="Enzyme_Code:EC:3.6.1.15"
/note="Enzyme_Code:EC:3.1.11.5"
BEGIN
1 MAEQVTGVIE RITHHNPDTG YCVLRVVARG HRDILTVVGS AQQIVAGEYI TATGAWVTDR
61 NYGLQFKASE IKTNPPHTVE GIAKYLGSGL VKGIGPGYAK RIVEVFGEKT LDVIDKSPEY
121 LSQVKGIGAK LIEKIRRSWE EQRESRKIMV FLQSHGIGTA RAVRIYKTYG DQAIELIKAN
181 PYRLSADIWG VGFDTADKLA VSLGIPRDSP FRAQAVVRHI LQEETGNGHV GYPEELLRER
241 AAEMTEIEPN GIIDAIEQLR ITDEIVRDSI GKATGGRLPT PPPPLPEGKG EKQRQPNPLT
301 PFPKKEKGTE PNTTDSTSQA PVLSPSPLRG GVGEGLQTES ASGSATGSAG FTLEDNLIFL
361 KPFFLAELGV ARAIKALAQG PHPLPSVNVD AAVAWVEKKM GIAFAASQRA AIKAAVTHKL
421 MVVTGGPGTG KTTIVRAIIE MFLAKSLRVL LTAPTGRAAK RLYESTGREA KTIHRLLEFN
481 PQQRQFTRNA EDPLDVDLLV VDETSMVDVV LMNKLLQAVP PYACVVLVGD VDQLPSVGAG
541 AVLTDLIESK AVPVARLTEV HRQAESSWIV RAAHAINHGM EPESAPPGSD GDFYFIEAND
601 PDAITERVIQ MVRDRIPAKF KLDPFRDIQV LSPQVKTPLG VANLNRELQA ALNPARLGVA
661 EVKRYDSVYR EGDKVMQVQN NYDREVFNGD IGRIEKIDND DQMLVVDFDG RPVEYEFSEL
721 DELQLSFACT IHKSQGSEYP AVVIPVHTQH FVMLQRNLLY TGITRGRKLV ALVGSRKAMW
781 IAVNTADTKR RYSLLKYRIK PEN
//