LOCUS VTR94259.1 273 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana radical sam protein : Radical SAM domain
protein OS=Halothece sp. (strain PCC 7418) GN=PCC7418_0013
PE=4 SV=1: Radical_SAM protein.
ACCESSION LR593886-3560
PROTEIN_ID VTR94259.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_34550"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|K9Y5V8|K9Y5V8_HALP7 ;
ALN/Q_length_ratio=0.985 ; DESCRIPTION=Radical SAM domain
protein OS=Halothece sp. (strain PCC 7418) GN=PCC7418_0013
PE=4 SV=1 ; EVALUE=2e-70 ; Q/S_length_ratio=0.878"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A1ZWM8|A1ZWM8_9BACT ;
ALN/Q_length_ratio=0.949 ; DESCRIPTION=Conserved Archaeal
protein OS=Microscilla marina ATCC 23134 GN=M23134_06756
PE=4 SV=1 ; EVALUE=1e-68 ; Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F0RGZ4|F0RGZ4_CELLC ;
ALN/Q_length_ratio=0.956 ; DESCRIPTION=Radical SAM domain
protein OS=Cellulophaga lytica (strain ATCC 23178 / DSM
7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 /
Cy l20) GN=Celly_2381 PE=4 SV=1 ; EVALUE=6e-68 ;
Q/S_length_ratio=0.965"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A088GBF2|A0A088GBF2_CELLY ;
ALN/Q_length_ratio=0.956 ; DESCRIPTION=Radical SAM protein
OS=Cellulophaga lytica GN=IX49_11890 PE=4 SV=1 ;
EVALUE=8e-68 ; Q/S_length_ratio=0.965"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|F4KXU6|F4KXU6_HALH1 ;
ALN/Q_length_ratio=0.864 ; DESCRIPTION=Radical SAM domain
protein OS=Haliscomenobacter hydrossis (strain ATCC 27775
/ DSM 1100 / LMG 10767 / O) GN=Halhy_4771 PE=4 SV=1 ;
EVALUE=1e-67 ; Q/S_length_ratio=0.968"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F8EQZ9|F8EQZ9_RUNSL ;
ALN/Q_length_ratio=0.956 ; DESCRIPTION=Radical SAM domain
protein OS=Runella slithyformis (strain ATCC 29530 / DSM
19594 / LMG 11500 / NCIMB 11436 / LSU 4) GN=Runsl_5903
PE=4 SV=1 ; EVALUE=8e-65 ; Q/S_length_ratio=0.968"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K9VRH3|K9VRH3_9CYAN ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Radical SAM domain
protein OS=Oscillatoria nigro-viridis PCC 7112
GN=Osc7112_5965 PE=4 SV=1 ; EVALUE=9e-65 ;
Q/S_length_ratio=0.892"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A0A1RVR7|A0A0A1RVR7_9FLAO ;
ALN/Q_length_ratio=0.956 ; DESCRIPTION=Radical SAM
superfamily protein OS=Chryseobacterium oranimense G311
GN=BN1195_02413 PE=4 SV=1 ; EVALUE=1e-62 ;
Q/S_length_ratio=0.951"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|U7QKW2|U7QKW2_9CYAN ;
ALN/Q_length_ratio=1.007 ; DESCRIPTION=Radical SAM
superfamily protein OS=Lyngbya aestuarii BL J GN=M595_2064
PE=4 SV=1 ; EVALUE=2e-62 ; Q/S_length_ratio=0.898"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A068NQL3|A0A068NQL3_9BACT ;
ALN/Q_length_ratio=0.930 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Fimbriimonas ginsengisoli
Gsoil 348 GN=OP10G_1657 PE=4 SV=1 ; EVALUE=2e-60 ;
Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q110K0|Q110K0_TRIEI ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Radical SAM
OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_2906
PE=4 SV=1 ; EVALUE=4e-60 ; Q/S_length_ratio=0.892"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L8AT94|L8AT94_BACIU ;
ALN/Q_length_ratio=1.004 ; DESCRIPTION=Uncharacterized
protein OS=Bacillus subtilis BEST7613 GN=BEST7613_5839
PE=4 SV=1 ; EVALUE=6e-56 ; Q/S_length_ratio=0.965"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A098XJU8|A0A098XJU8_9CYAN ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Radical SAM protein
OS=Tolypothrix bouteillei VB521301 GN=DA73_17110 PE=4 SV=1
; EVALUE=1e-55 ; Q/S_length_ratio=0.892"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|K9XQ38|K9XQ38_STAC7 ;
ALN/Q_length_ratio=1.018 ; DESCRIPTION=Radical SAM domain
protein OS=Stanieria cyanosphaera (strain ATCC 29371 / PCC
7437) GN=Sta7437_1164 PE=4 SV=1 ; EVALUE=1e-53 ;
Q/S_length_ratio=0.892"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K9ZNP6|K9ZNP6_ANACC ;
ALN/Q_length_ratio=1.018 ; DESCRIPTION=Radical SAM domain
protein OS=Anabaena cylindrica (strain ATCC 27899 / PCC
7122) GN=Anacy_5546 PE=4 SV=1 ; EVALUE=4e-53 ;
Q/S_length_ratio=0.853"
/note="Pfam_scan:hit_1 (26..199);
Pfam:PF04055.16:Radical_SAM;
Pfam_type:Domain;HMM_aln_Length:156; HMM_Length:166;
EVALUE:1.9e-09; BITSCORE: 37.9"
/note="GO_domain:GO:0003674"
BEGIN
1 MELIESRSIF SPATGFIRRG GFEWTCNPYI GCTFGCTYCY AAFLPQNRRP PDEWGKWITA
61 KKNAAALAEK QAPRVAGEPV YMSSVTDPYQ PIERGLMLTR GILEALLPHQ PRLTIQTRGP
121 LVARDIDVLR DFRSLRVNMS IPTDSERVRQ QFEPKAPPLD RRWDALAQLK DAGIAVGVCV
181 TPTLPIANVD TFARRIADFK PDVVVCQDFH DAGGRFGADT GAEARALLAE TGWGPADYRR
241 FVNRLRLSTT VFEGETGFFP PPAVPAGVEG SRR
//