LOCUS VTR94257.1 378 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rnd transporter : Efflux transporter,
RND family, MFP subunit OS=Desulfobacca acetoxidans (strain
ATCC 700848 / DSM 11109 / ASRB2) GN=Desac_1403 PE=4 SV=
1: HlyD protein.
ACCESSION LR593886-3558
PROTEIN_ID VTR94257.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_34570"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|F2NJ87|F2NJ87_DESAR ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Desulfobacca acetoxidans
(strain ATCC 700848 / DSM 11109 / ASRB2) GN=Desac_1403
PE=4 SV=1 ; EVALUE=1e-95 ; Q/S_length_ratio=0.962"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|H5SEL2|H5SEL2_9ZZZZ ;
ALN/Q_length_ratio=0.865 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=uncultured prokaryote
GN=HGMM_F17C12C15 PE=4 SV=1 ; EVALUE=4e-95 ;
Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A5G433|A5G433_GEOUR ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Geobacter uraniireducens
(strain Rf4) GN=Gura_2372 PE=4 SV=1 ; EVALUE=1e-94 ;
Q/S_length_ratio=0.957"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q39V42|Q39V42_GEOMG ;
ALN/Q_length_ratio=0.929 ; DESCRIPTION=Efflux pump, RND
family, membrane fusion lipoprotein OS=Geobacter
metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
GN=Gmet_1651 PE=4 SV=1 ; EVALUE=3e-92 ;
Q/S_length_ratio=0.929"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|H1L1Y5|H1L1Y5_GEOME ;
ALN/Q_length_ratio=0.929 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Geobacter metallireducens RCH3
GN=GeomeDRAFT_0031 PE=4 SV=1 ; EVALUE=3e-92 ;
Q/S_length_ratio=0.929"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0LFE8|A0LFE8_SYNFM ;
ALN/Q_length_ratio=0.939 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB) GN=Sfum_0450 PE=4 SV=1 ;
EVALUE=1e-90 ; Q/S_length_ratio=0.929"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|I3IKQ4|I3IKQ4_9PLAN ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=Efflux transporter
protein OS=planctomycete KSU-1 GN=KSU1_C0703 PE=4 SV=1 ;
EVALUE=3e-88 ; Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|B3E5R2|B3E5R2_GEOLS ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=Glov_2439 PE=4 SV=1 ;
EVALUE=1e-84 ; Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|B8DLT8|B8DLT8_DESVM ;
ALN/Q_length_ratio=0.987 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Desulfovibrio vulgaris (strain
Miyazaki F / DSM 19637) GN=DvMF_1516 PE=4 SV=1 ;
EVALUE=2e-84 ; Q/S_length_ratio=0.859"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|B5YKJ3|B5YKJ3_THEYD ;
ALN/Q_length_ratio=0.849 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=THEYE_A0922 PE=4 SV=1 ; EVALUE=3e-83 ;
Q/S_length_ratio=1.044"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|B5E8B2|B5E8B2_GEOBB ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=Efflux pump, RND
family, membrane fusion lipoprotein OS=Geobacter
bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)
GN=Gbem_0064 PE=4 SV=1 ; EVALUE=3e-83 ;
Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q01VQ2|Q01VQ2_SOLUE ;
ALN/Q_length_ratio=1.048 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Solibacter usitatus (strain
Ellin6076) GN=Acid_5313 PE=4 SV=1 ; EVALUE=4e-83 ;
Q/S_length_ratio=0.865"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|G1UWX0|G1UWX0_9DELT ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=Uncharacterized
protein OS=Desulfovibrio sp. 6_1_46AFAA
GN=HMPREF1022_03093 PE=4 SV=1 ; EVALUE=1e-79 ;
Q/S_length_ratio=1.030"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D9YHB4|D9YHB4_9DELT ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Desulfovibrio sp. 3_1_syn3
GN=HMPREF0326_02893 PE=4 SV=1 ; EVALUE=1e-79 ;
Q/S_length_ratio=1.030"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q74CR2|Q74CR2_GEOSL ;
ALN/Q_length_ratio=0.870 ; DESCRIPTION=Efflux pump, RND
family, membrane fusion lipoprotein OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=GSU1610 PE=4 SV=1 ; EVALUE=4e-79 ;
Q/S_length_ratio=0.959"
/note="Pfam_scan:hit_1 (63..351); Pfam:PF00529.15:HlyD;
Pfam_type:Family;HMM_aln_Length:302; HMM_Length:305;
EVALUE:8.1e-30; BITSCORE: 104.1"
/note="GO_domain:GO:0055085"
/note="GO_domain:GO:0005575"
BEGIN
1 MYLPHTILTP RRLALLLLAL AGCAKPPAPK AEPAPAPVSV ATADKKTVAV QVRAIGSVRT
61 ISTVNVRPAI AGELTHVHFR EGDTVRRGQK LFTIDPRPFE AALQQAEATL ARNLATLKGA
121 ELSLARVERL GSSGIGSVVE ADSTRATVEA DRAAVEADRA AVKLAKLQLE YTTITAPIDG
181 RTGALHVTAG NRISAADANP LVVINQLSPI DVQFAVPERA LPTVMAAFEG RGRLRAEATP
241 RHGGPKAIGE LTFVDNAVEP GTGTVQLKSQ FPNTNRALWP GLFVDVVLDL NERPNSVVVP
301 TAAVQSGQKG QYVYVVLPEQ TVELRYVTVA FESSGETVVT SGLKGGEVVV TDGHLRLAPG
361 LKVSIKNPSA LPPAGSAK
//