LOCUS VTR94239.1 561 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana site-specific recombinase : Site-specific
recombinase OS=Rhizobium fredii (strain HH103) GN=SFHH103_03916
PE=4 SV=1: Resolvase: Recombinase protein.
ACCESSION LR593886-3540
PROTEIN_ID VTR94239.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_34750"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|G9A697|G9A697_RHIFH ;
ALN/Q_length_ratio=0.661 ; DESCRIPTION=Site-specific
recombinase OS=Rhizobium fredii (strain HH103)
GN=SFHH103_03916 PE=4 SV=1 ; EVALUE=5e-71 ;
Q/S_length_ratio=1.442"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|S6HPC1|S6HPC1_9PSED ;
ALN/Q_length_ratio=0.781 ; DESCRIPTION=Recombinase-related
protein OS=Pseudomonas sp. CF149 GN=CF149_19311 PE=4 SV=1
; EVALUE=2e-63 ; Q/S_length_ratio=0.967"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|S2ET53|S2ET53_9PSED ;
ALN/Q_length_ratio=0.772 ; DESCRIPTION=Uncharacterized
protein OS=Pseudomonas sp. G5(2012) GN=PG5_45890 PE=4 SV=1
; EVALUE=4e-63 ; Q/S_length_ratio=0.847"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|K0WFQ9|K0WFQ9_9RHIZ ;
ALN/Q_length_ratio=0.863 ; DESCRIPTION=Site-specific
recombinase OS=Rhizobium sp. Pop5 GN=RCCGEPOP_06266 PE=4
SV=1 ; EVALUE=3e-62 ; Q/S_length_ratio=0.976"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q88NT6|Q88NT6_PSEPK ;
ALN/Q_length_ratio=0.690 ; DESCRIPTION=Recombinase-related
protein OS=Pseudomonas putida (strain KT2440) GN=PP_1118
PE=4 SV=1 ; EVALUE=4e-62 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A077F7Z7|A0A077F7Z7_9PSED ;
ALN/Q_length_ratio=0.906 ;
DESCRIPTION=Recombinase/resolvase OS=Pseudomonas
alkylphenolia GN=PSAKL28_11840 PE=4 SV=1 ; EVALUE=1e-61 ;
Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A059V3E6|A0A059V3E6_PSEPU ;
ALN/Q_length_ratio=0.592 ; DESCRIPTION=Recombinase-related
protein OS=Pseudomonas putida GN=DW66_5486 PE=4 SV=1 ;
EVALUE=7e-61 ; Q/S_length_ratio=0.981"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|U9L8Q9|U9L8Q9_PSEAI ;
ALN/Q_length_ratio=0.708 ; DESCRIPTION=Uncharacterized
protein OS=Pseudomonas aeruginosa BWHPSA016 GN=Q029_05731
PE=4 SV=1 ; EVALUE=5e-60 ; Q/S_length_ratio=0.976"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|V9V5G6|V9V5G6_9PSED ;
ALN/Q_length_ratio=0.690 ; DESCRIPTION=Recombinase
OS=Pseudomonas monteilii SB3101 GN=X970_19980 PE=4 SV=1 ;
EVALUE=7e-60 ; Q/S_length_ratio=0.995"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|V9UP60|V9UP60_9PSED ;
ALN/Q_length_ratio=0.690 ; DESCRIPTION=Recombinase
OS=Pseudomonas monteilii SB3078 GN=X969_20345 PE=4 SV=1 ;
EVALUE=7e-60 ; Q/S_length_ratio=0.995"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q1QRV3|Q1QRV3_NITHX ;
ALN/Q_length_ratio=0.579 ; DESCRIPTION=Recombinase
OS=Nitrobacter hamburgensis (strain X14 / DSM 10229)
GN=Nham_0143 PE=4 SV=1 ; EVALUE=3e-59 ;
Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|S9P3I1|S9P3I1_9DELT ;
ALN/Q_length_ratio=0.670 ; DESCRIPTION=Uncharacterized
protein OS=Cystobacter fuscus DSM 2262 GN=D187_004726 PE=4
SV=1 ; EVALUE=7e-59 ; Q/S_length_ratio=1.098"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|U1TDF9|U1TDF9_PSEFL ;
ALN/Q_length_ratio=0.576 ; DESCRIPTION=Uncharacterized
protein OS=Pseudomonas fluorescens EGD-AQ6 GN=O204_04555
PE=4 SV=1 ; EVALUE=1e-58 ; Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|X6J142|X6J142_9RHIZ ;
ALN/Q_length_ratio=0.661 ; DESCRIPTION=Resolvase
OS=Mesorhizobium sp. L103C565B0 GN=X730_13530 PE=4 SV=1 ;
EVALUE=3e-58 ; Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|E6UT30|E6UT30_CLOTL ;
ALN/Q_length_ratio=0.674 ; DESCRIPTION=Resolvase domain
protein OS=Clostridium thermocellum (strain DSM 1313 / LMG
6656 / LQ8) GN=Clo1313_1643 PE=4 SV=1 ; EVALUE=6e-58 ;
Q/S_length_ratio=1.465"
/note="Pfam_scan:hit_1 (14..172);
Pfam:PF00239.16:Resolvase;
Pfam_type:Domain;HMM_aln_Length:137; HMM_Length:141;
EVALUE:3.3e-16; BITSCORE: 59.4"
/note="Pfam_scan:hit_2 (196..296);
Pfam:PF07508.8:Recombinase;
Pfam_type:Family;HMM_aln_Length:99; HMM_Length:102;
EVALUE:4.4e-15; BITSCORE: 55.7"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MARSKSAPSE LPVAYSYIRF STPDQGAGDS IRRQESLRDD WCARNGVRLV ETLRDYGISA
61 FKGRHRADDR AALGRFLSLV KAGTVKPGSY LVVEQFDRLS REQIRPALTL LLNLIEAGVR
121 VVQLMPVEKV YGEDVEPMAL MMAIMELSRG HSESMAKSGR GGLAWANKRK QATQKVLTRI
181 VPAWCKIAGE KIVLDEPKAE VVRRIYNMAL GGRGVPTIAK TLNIERVAPL SGRSKRWAQS
241 SISYILCNRA VIGEYQPHTH HGRERREPDG PPVTGYYPAV LTEEMFNAVR MAMSRRNRKG
301 SGRGDRLLSI FSGLLYDARN GETLHVLNNT VNGRRISPYE SSRGLPGYKW VSFPADTFEA
361 AVLSKFREID AREITGNRQD PTAGAAKRLS EIERRLISIK EQLVSGDEDV GPVMDALRNL
421 EAERKAAADQ LRTARQEAAS TLVNAWEDCQ SLADLLATSP DPADTRARLR AAVHRVVKQV
481 YCLFVAQAKT RIAAVQVWFE GEESHRDYLI VHRSGTGNRV AEWFVRSLVL PTSTAGIDLR
541 KREDVALLEP ILESLNLATN E
//