LOCUS VTR94236.1 2368 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rhs repeat-associated core domain-containing
protein : RHS repeat-associated core domain protein OS=
Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_0717 PE=4 SV=1: RHS_repeat
protein.
ACCESSION LR593886-3537
PROTEIN_ID VTR94236.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_34780"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E8QWU3|E8QWU3_ISOPI ;
ALN/Q_length_ratio=0.448 ; DESCRIPTION=YD repeat protein
OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 /
IS1B) GN=Isop_2419 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.951"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0D5P0|L0D5P0_SINAD ;
ALN/Q_length_ratio=0.436 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_0291 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.093"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0D7A8|L0D7A8_SINAD ;
ALN/Q_length_ratio=0.641 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_0717 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.400"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L0DA66|L0DA66_SINAD ;
ALN/Q_length_ratio=0.307 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_1341 PE=4 SV=1 ; EVALUE=1e-166 ;
Q/S_length_ratio=1.061"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L0D9R6|L0D9R6_SINAD ;
ALN/Q_length_ratio=0.413 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_1226 PE=4 SV=1 ; EVALUE=1e-123 ;
Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D5STB0|D5STB0_PLAL2 ;
ALN/Q_length_ratio=0.418 ; DESCRIPTION=AmoP
OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776
/ IFAM 1008 / 290) GN=Plim_1036 PE=4 SV=1 ; EVALUE=1e-118
; Q/S_length_ratio=1.258"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D5SST5|D5SST5_PLAL2 ;
ALN/Q_length_ratio=0.511 ; DESCRIPTION=YD repeat protein
OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776
/ IFAM 1008 / 290) GN=Plim_3067 PE=4 SV=1 ; EVALUE=1e-110
; Q/S_length_ratio=1.182"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D2QZZ5|D2QZZ5_PIRSD ;
ALN/Q_length_ratio=0.319 ; DESCRIPTION=YD repeat protein
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=Psta_3703 PE=4 SV=1 ; EVALUE=5e-91 ;
Q/S_length_ratio=1.159"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D5SQM4|D5SQM4_PLAL2 ;
ALN/Q_length_ratio=0.219 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_2663 PE=4 SV=1 ;
EVALUE=4e-81 ; Q/S_length_ratio=3.373"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D5SWT5|D5SWT5_PLAL2 ;
ALN/Q_length_ratio=0.210 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_1602 PE=4 SV=1 ;
EVALUE=2e-71 ; Q/S_length_ratio=3.145"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|D5SWT3|D5SWT3_PLAL2 ;
ALN/Q_length_ratio=0.157 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_1600 PE=4 SV=1 ;
EVALUE=8e-45 ; Q/S_length_ratio=3.901"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q1Q7C5|Q1Q7C5_9BACT ;
ALN/Q_length_ratio=0.417 ; DESCRIPTION=Similar to
wall-associated protein OS=Candidatus Kuenenia
stuttgartiensis GN=WapA PE=4 SV=1 ; EVALUE=2e-41 ;
Q/S_length_ratio=1.127"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F4KRN7|F4KRN7_HALH1 ;
ALN/Q_length_ratio=0.349 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Haliscomenobacter
hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O)
GN=Halhy_1128 PE=4 SV=1 ; EVALUE=3e-37 ;
Q/S_length_ratio=1.748"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D0THP1|D0THP1_9BACE ;
ALN/Q_length_ratio=0.372 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Bacteroides sp.
2_1_33B GN=HMPREF0103_2864 PE=4 SV=1 ; EVALUE=4e-37 ;
Q/S_length_ratio=1.693"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A090KF71|A0A090KF71_9BACT ;
ALN/Q_length_ratio=0.055 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=8e-37 ;
Q/S_length_ratio=10.120"
/note="Pfam_scan:hit_1 (1932..1971);
Pfam:PF05593.9:RHS_repeat;
Pfam_type:Repeat;HMM_aln_Length:36; HMM_Length:38;
EVALUE:1.9e-05; BITSCORE: 24.6"
/note="GO_domain:GO:0008150"
BEGIN
1 MDLNGDHKAE VILGGSSGGW VKTYNPTTGA PIAGPLGCFQ AFGTGYTGSV FVNSDSLAND
61 VDGDGTPDLV VGTDVGVAAE VKVFSGATGG VLYDFQPFGS GFTGGARVAL AYADDDDRAD
121 IVVGSGTGAA DVRVFSGATG AQLASPLGQY APFGASTGGV FVAASNDPIA PTVMWTTAPS
181 SAKVGQVVRG VITITGQSPN VPTGTATLKA TVIPGGTVLT LDTVSLVPVG SGYQATATFD
241 FGSLPLGNYL LSATYNGDSN YSSNTAGGGS FGVTAPVAGV PAPVYRGGYN PDLSTGVAPG
301 SGSITVSSCP DLSSIGMGDL FGIDHSWTSA PGYDDGLTGT GGSAGQFSHA VQVNGDTSIA
361 LALGGSDAQF FDFYGGAYHG RFGDPTTLVH DTTNGLFVAT DGTGRTLTYY DFSASTPSGR
421 AGQLAKVTAP DGQLTQVTSW DGSGRPTEVQ RTTGSGGSAL TESFVYAYVA SGTNAGLLQT
481 VTQRTQVGAG AWGTVRSAEY TYHDGTTSAG LAKEMRTAVV KDASGNVIDQ SYYRYYGSSS
541 GSGSGSGSGS GSGSGSGSGS SGKMKFAFGA DAYARLVSAL GTSVDALTDA QIDDYADKYI
601 EYSASGQASK VVDAAAGCSV CAGGQGAFNY TYSTNSAANL LDTNVWKNKA VETLPDGSTN
661 TFYTNGFGQT MLRVFTDTAS NVWRWYTKYD AAGRTILEAG PSVVTGFSES YADLVNFVSG
721 NAQYLSDSAG LVTAYTYGAT TTATTSTVGD ALGYLKEVDL KQGETGTAVP QQVLAYIKNT
781 VGSIDFFILA SSTVYRNDNG TGAQATSYAY TYLSGTNQIA STVTTLPTVT TAQNGSNSAT
841 TVTTVNDTFG HPVWTKDQAG IISYTQYDTL TGAVVKTITD VDTAQTGTFA NLPSGWSTPS
901 GAGLHLTTTY EVDALGRATK VTYPNGRVDY TVYNDANHEV RTYTGWDATN NVATGPTTVN
961 RMDRAGSYTE TLTMSAAPSV SGGRPTGTEG IAKIQSLSRT YTNAAGQAIY SDAYFNLTGL
1021 AYSTSTTLGT EGVNFYRTRY QYDDQGRLNK TTSAQGTISR TVYDSLGRAV SEWVGTDDTP
1081 TSGFWSPTNL TGTNTVKVRE YEYDGGGVGD GNLTKVTEIP GGGAANRVTQ TWFDWRNRAV
1141 AVKSGVEGSE STSVNRPLVY TDYDNLGEIT TTRVYDADGV TPTVTGGVPQ PLSSSLLRGQ
1201 ATTSYDELGR AYRTDTYSVD SSTGSVGTNT LYSQTWYDAR GQVIKTSSPG GIVQKTTFDG
1261 AGRTVATYTS DGGGDTGYGD ADDVTGDTVL NQTEYVYDGN GSVLQVTTRD RFHDASGTGA
1321 LGTPTTGVGA RVSYTGYYYD LAGRTVATVD VGTNGGSSWS RPGTVPSRSA TVLVNSTKYA
1381 TDAVQVIALT GSPTGGTFTL TLGGNTTSAL AYNASAATVQ SALAGLASIG SGNVQVSAAA
1441 GGGWEIRFIG TKGGAYQSAI TGNGSGLTGG TSPAVSTSTV NAGGDVGLAA EVTDPVGHVS
1501 RIYADALGRT TRSVTNFVDG VVSDTDDKAT GYTYNGTGVT SLIAYLTGGG VQTTGYVYGV
1561 TVATGSTIES NDIVRLTQWA DPTTGAASSS QQEAIAVNAL GQTLTSTDRN GSVHTLTYDV
1621 LGRVVSDAVT TLGSGVDGSV RRIECAYDSQ GNAYLITSYN AASGGSVVNQ TQRAFNGLGQ
1681 MTTEWQSHSG AVNTSTSPKV QYAYSEMTGG ANHSRLTSIT YPSGYVLTYN YSSGLNDSIS
1741 RLSSLSDSTG ALESYDYLGW GIVVRRAHSQ PNVDLSYIKH SGESNGDAGD QYTGLDRFGR
1801 VVDQRWLNPT TGTATDRFQY GYDQDGNRTY RDNLVNTAFG EVYSYDALDQ LTGYDRGTLN
1861 GTKTGITGTV ARSQDWDYDA LGNFDSVTTN GTAQTRTANK QNEITGISGA TTPTYDANGN
1921 MTGDETSKQF VYDAWNRLVA VKNSGGSTLK TYAYDGANRR VSETVSGTTT DLFYSKDWQV
1981 LEEKVGSATK NRYVWSPVYV DAMVLRDRDA DGSTGNGLEE RLWVQQDANW NVTALVNGSG
2041 AVVERYVYDP YGAATIYDAS YVMRASSLYD AKYFSQGRPL DAASGNYYFR ERDYRPTLGR
2101 FINLDPVTYA SGDINLYRFV ANSPVNLSDP SGLAPFSDIP SIGGSIGGGV LDVISYPDPA
2161 KITWDYFKIY ITPPEGQRPG ERARTIGQFV PVLIDPSIRI IKLPCSPGYV AVMKVNKIDL
2221 KYRFRFDNSW FYDDPLNKIT KEKKEILLKH EQFHYKLSLD FVAQATERWN SHSKLGKKGI
2281 VGIGFGFTPG QATEAAQKRV LAALQVHINE LSKSLNSLQL AYDRVSQIPL PGGGGDITDD
2341 SQSLGERAAK KAMFDSITRA IERMLGLR
//