LOCUS VTR94188.1 326 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana integrase : Site-specific recombinase
XerD OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7582 PE=4 SV=
1: Phage_int_SAM_1: Phage_integrase protein.
ACCESSION LR593886-3489
PROTEIN_ID VTR94188.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_35260"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DQC3|L0DQC3_SINAD ;
ALN/Q_length_ratio=0.929 ; DESCRIPTION=Site-specific
recombinase XerD OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7582
PE=4 SV=1 ; EVALUE=1e-115 ; Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DQH8|L0DQH8_SINAD ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Site-specific
recombinase XerD OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7675
PE=4 SV=1 ; EVALUE=1e-114 ; Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|Q5NWK4|Q5NWK4_AROAE ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Putative site
specific integrase OS=Aromatoleum aromaticum (strain EbN1)
GN=int PE=4 SV=1 ; EVALUE=1e-101 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5U0X9|M5U0X9_9PLAN ;
ALN/Q_length_ratio=0.966 ;
DESCRIPTION=Integrase/recombinase OS=Rhodopirellula
sallentina SM41 GN=RSSM_03424 PE=4 SV=1 ; EVALUE=1e-100 ;
Q/S_length_ratio=0.982"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A010S056|A0A010S056_PSEFL ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Integrase
OS=Pseudomonas fluorescens HK44 GN=HK44_002080 PE=4 SV=1 ;
EVALUE=1e-100 ; Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A038H1Z5|A0A038H1Z5_9BURK ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=Integrase
OS=Burkholderia sp. MP-1 GN=BG58_30650 PE=4 SV=1 ;
EVALUE=9e-99 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F3INQ4|F3INQ4_PSESL ;
ALN/Q_length_ratio=0.963 ;
DESCRIPTION=Integrase/recombinase XerD, putative
OS=Pseudomonas syringae pv. lachrymans str. M302278
GN=PLA106_21973 PE=4 SV=1 ; EVALUE=1e-98 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|K2SPX3|K2SPX3_9PSED ;
ALN/Q_length_ratio=0.883 ;
DESCRIPTION=Integrase/recombinase XerD OS=Pseudomonas
avellanae BPIC 631 GN=Pav631_1029 PE=4 SV=1 ; EVALUE=6e-98
; Q/S_length_ratio=1.124"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|W5YE02|W5YE02_KOMXY ;
ALN/Q_length_ratio=0.966 ;
DESCRIPTION=Integrase/recombinase XerD, putative
OS=Gluconacetobacter xylinus E25 GN=H845_3263 PE=4 SV=1 ;
EVALUE=6e-98 ; Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A0A3P7Q0|A0A0A3P7Q0_BURPE ;
ALN/Q_length_ratio=0.936 ; DESCRIPTION=Phage integrase
family protein OS=Burkholderia pseudomallei MSHR4868
GN=X990_6008 PE=4 SV=1 ; EVALUE=7e-98 ;
Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A0A5BES4|A0A0A5BES4_9BURK ;
ALN/Q_length_ratio=0.936 ; DESCRIPTION=Phage integrase
family protein OS=Burkholderia sp. MSHR4018 GN=X986_6138
PE=4 SV=1 ; EVALUE=7e-98 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A0A5B286|A0A0A5B286_9BURK ;
ALN/Q_length_ratio=0.936 ; DESCRIPTION=Phage integrase
family protein OS=Burkholderia sp. MSHR4009 GN=X984_6134
PE=4 SV=1 ; EVALUE=7e-98 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D4Z8P7|D4Z8P7_SPHJU ;
ALN/Q_length_ratio=0.963 ;
DESCRIPTION=Invertase/recombinase like protein
OS=Sphingobium japonicum (strain NBRC 101211 / UT26S)
GN=SJA_P1-00270 PE=4 SV=1 ; EVALUE=2e-97 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|Q1YDG8|Q1YDG8_MOBAS ;
ALN/Q_length_ratio=0.933 ;
DESCRIPTION=Integrase/recombinase OS=Manganese-oxidizing
bacterium (strain SI85-9A1) GN=SI859A1_03675 PE=4 SV=1 ;
EVALUE=2e-96 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|I5BJ02|I5BJ02_9SPHN ;
ALN/Q_length_ratio=0.963 ;
DESCRIPTION=Invertase/recombinase like protein
OS=Sphingobium indicum B90A GN=SIDU_00269 PE=4 SV=1 ;
EVALUE=2e-95 ; Q/S_length_ratio=1.019"
/note="Pfam_scan:hit_1 (35..113);
Pfam:PF02899.12:Phage_int_SAM_1;
Pfam_type:Domain;HMM_aln_Length:66; HMM_Length:84;
EVALUE:1.7e-09; BITSCORE: 37.6"
/note="Pfam_scan:hit_2 (137..315);
Pfam:PF00589.17:Phage_integrase;
Pfam_type:Family;HMM_aln_Length:166; HMM_Length:173;
EVALUE:2.1e-20; BITSCORE: 73.1"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MIARCSFCHP THLILPSTRR VPLPALISAV GPHAIQRLVQ FFTAEIRNPN TRAAYARAID
61 RFDRWGSANH APLADLTPVH VAAYIEHLGR ELSKPSVKQH LAALRMLFDY LVTGIVPFNP
121 VSPVRGPKYV LKSGKTPVMN RDEVRQLFAA LAGPMIADLR DRALIGVLVY SFARVSAVLH
181 MDVGDYYQQG ERWWVRLHEK GGKDHAVPVH HTAEEYLDAY LAAAGSVTRG DTPLFRTLDR
241 HRRLSADRLD RHEALAMVKR RCRQAGLGDR FGCHTFRATG ITAYLGNGGT VEKAQAIAAH
301 ESPRTTKLYD RTCDAISLDE IERIVF
//