LOCUS VTR94187.1 300 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana integrase : Integrase/recombinase OS=
Aromatoleum aromaticum (strain EbN1) GN=int PE=4 SV=1:
Phage_int_SAM_4: Phage_integrase protein.
ACCESSION LR593886-3488
PROTEIN_ID VTR94187.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_35270"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|Q5NWF2|Q5NWF2_AROAE ;
ALN/Q_length_ratio=0.943 ;
DESCRIPTION=Integrase/recombinase OS=Aromatoleum
aromaticum (strain EbN1) GN=int PE=4 SV=1 ; EVALUE=1e-103
; Q/S_length_ratio=0.971"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A011QIT8|A0A011QIT8_9PROT ;
ALN/Q_length_ratio=0.920 ; DESCRIPTION=Tyrosine
recombinase XerD OS=Candidatus Accumulibacter sp. BA-93
GN=xerD_1 PE=4 SV=1 ; EVALUE=2e-99 ;
Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|W4NVQ8|W4NVQ8_9BURK ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Mobile element
protein OS=Burkholderia caribensis MBA4 GN=K788_001795
PE=4 SV=1 ; EVALUE=4e-98 ; Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A069PCB4|A0A069PCB4_9BURK ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=Integrase
OS=Burkholderia glathei GN=BG61_03370 PE=4 SV=1 ;
EVALUE=1e-97 ; Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|B2JTR1|B2JTR1_BURP8 ;
ALN/Q_length_ratio=0.920 ; DESCRIPTION=Integrase family
protein OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=Bphy_6957 PE=4 SV=1 ; EVALUE=1e-96 ;
Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|K8RND8|K8RND8_9BURK ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=Integrase
OS=Burkholderia sp. SJ98 GN=BURK_004977 PE=4 SV=1 ;
EVALUE=9e-96 ; Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|B2JST0|B2JST0_BURP8 ;
ALN/Q_length_ratio=0.920 ; DESCRIPTION=Integrase family
protein OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=Bphy_6605 PE=4 SV=1 ; EVALUE=3e-94 ;
Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|I3XHD3|I3XHD3_RHIFR ;
ALN/Q_length_ratio=0.937 ; DESCRIPTION=Putative
integrase/recombinase y4qK OS=Sinorhizobium fredii USDA
257 GN=USDA257_p05740 PE=4 SV=1 ; EVALUE=7e-92 ;
Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|G9AD03|G9AD03_RHIFH ;
ALN/Q_length_ratio=0.937 ; DESCRIPTION=Putative
integrase/recombinase OS=Rhizobium fredii (strain HH103)
GN=SFHH103_04456 PE=4 SV=1 ; EVALUE=7e-92 ;
Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A090HFM2|A0A090HFM2_9BURK ;
ALN/Q_length_ratio=0.883 ; DESCRIPTION=Mobile element
protein OS=Burkholderia glathei GN=BGLT_01300 PE=4 SV=1 ;
EVALUE=4e-91 ; Q/S_length_ratio=1.068"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A060PCX9|A0A060PCX9_9BURK ;
ALN/Q_length_ratio=0.860 ; DESCRIPTION=Integrase
OS=Burkholderia sp. RPE67 GN=BRPE67_ECDS01890 PE=4 SV=1 ;
EVALUE=1e-90 ; Q/S_length_ratio=1.149"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|W6RX09|W6RX09_9RHIZ ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=Putative
integrase/recombinase protein OS=Rhizobium sp. LPU83
GN=LPU83_3098 PE=4 SV=1 ; EVALUE=1e-89 ;
Q/S_length_ratio=1.045"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A013WEI1|A0A013WEI1_9SPHN ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=Integrase
OS=Sphingobium sp. Ant17 GN=BF95_02110 PE=4 SV=1 ;
EVALUE=2e-89 ; Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q2W8U5|Q2W8U5_MAGSA ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=Integrase
OS=Magnetospirillum magneticum (strain AMB-1 / ATCC
700264) GN=amb0926 PE=4 SV=1 ; EVALUE=2e-89 ;
Q/S_length_ratio=1.053"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|G6Y2T3|G6Y2T3_9RHIZ ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=Putative
integrase/recombinase OS=Mesorhizobium amorphae CCNWGS0123
GN=MEA186_01131 PE=4 SV=1 ; EVALUE=4e-89 ;
Q/S_length_ratio=1.045"
/note="Pfam_scan:hit_1 (4..84);
Pfam:PF13495.1:Phage_int_SAM_4;
Pfam_type:Domain;HMM_aln_Length:80; HMM_Length:85;
EVALUE:2.8e-17; BITSCORE: 62.7"
/note="Pfam_scan:hit_2 (101..265);
Pfam:PF00589.17:Phage_integrase;
Pfam_type:Family;HMM_aln_Length:168; HMM_Length:173;
EVALUE:5.7e-45; BITSCORE: 153.0"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MTPLRQRMLD DMRMRNLAPG TQDHYVRAVA RFAKHFNRSP DELGPEHVRE YLLHLIRVGA
61 SWSLYNVVRG GILFFYRVTL NRKDWAFGEI ACAKNRPHLP VVLSREEVNQ FLDAAPDLRH
121 RAILSLIYAT GLRVSEVAAL AVGDIDSQRM VVRVGHGKGD KDRYVMLSPK ILELLRTYWR
181 AYQPKDWLFV GEAPGRHLNT RTVQLACRDA AQAAGLTKVV TPHVLRHTFA THLLEGGTNL
241 RTIQVLLGHR SLQTTARYLY VSMEAVTGTV SPFDRLDAAV TSPAPAAEVN RDARALRWPT
//