LOCUS VTR94178.1 475 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana carbohydrate-selective porin : Carbohydrate-
selective porin OprB OS=Pedosphaera parvula (strain Ellin514)
GN=Cflav_PD0649 PE=4 SV=1: OprB protein.
ACCESSION LR593886-3479
PROTEIN_ID VTR94178.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_35360"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|B9XQZ0|B9XQZ0_PEDPL ;
ALN/Q_length_ratio=0.857 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD0649
PE=4 SV=1 ; EVALUE=1e-116 ; Q/S_length_ratio=1.051"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D5SZ12|D5SZ12_PLAL2 ;
ALN/Q_length_ratio=0.823 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776
/ IFAM 1008 / 290) GN=Plim_4102 PE=4 SV=1 ; EVALUE=5e-95 ;
Q/S_length_ratio=0.910"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A6C291|A6C291_9PLAN ;
ALN/Q_length_ratio=0.876 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_03109
PE=4 SV=1 ; EVALUE=1e-80 ; Q/S_length_ratio=0.985"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L0DGZ8|L0DGZ8_SINAD ;
ALN/Q_length_ratio=0.876 ;
DESCRIPTION=Carbohydrate-selective porin OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_4340 PE=4 SV=1 ; EVALUE=2e-80 ;
Q/S_length_ratio=0.971"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5TQT9|M5TQT9_9PLAN ;
ALN/Q_length_ratio=0.709 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula sp. SWK7 GN=RRSWK_01370 PE=4 SV=1 ;
EVALUE=2e-78 ; Q/S_length_ratio=1.393"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L0DK95|L0DK95_SINAD ;
ALN/Q_length_ratio=0.800 ;
DESCRIPTION=Carbohydrate-selective porin OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_5108 PE=4 SV=1 ; EVALUE=8e-77 ;
Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A3ZR18|A3ZR18_9PLAN ;
ALN/Q_length_ratio=0.819 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_21107 PE=4 SV=1 ; EVALUE=2e-76 ;
Q/S_length_ratio=1.126"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5TX98|M5TX98_9PLAN ;
ALN/Q_length_ratio=0.792 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula sallentina SM41 GN=RSSM_04703 PE=4 SV=1
; EVALUE=5e-73 ; Q/S_length_ratio=1.060"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q7ULG9|Q7ULG9_RHOBA ;
ALN/Q_length_ratio=0.787 ; DESCRIPTION=Putative
uncharacterized protein OS=Rhodopirellula baltica (strain
SH1) GN=RB9508 PE=4 SV=1 ; EVALUE=2e-71 ;
Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|F2AK80|F2AK80_RHOBT ;
ALN/Q_length_ratio=0.787 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula baltica WH47 GN=RBWH47_03866 PE=4 SV=1 ;
EVALUE=2e-71 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A090MHU1|A0A090MHU1_9BACT ;
ALN/Q_length_ratio=0.901 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=2e-71 ;
Q/S_length_ratio=1.060"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M2AA35|M2AA35_9PLAN ;
ALN/Q_length_ratio=0.787 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula europaea 6C GN=RE6C_05995 PE=4 SV=1 ;
EVALUE=3e-71 ; Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5SAZ4|M5SAZ4_9PLAN ;
ALN/Q_length_ratio=0.787 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula europaea SH398 GN=RESH_00635 PE=4 SV=1 ;
EVALUE=3e-71 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|L7C7G4|L7C7G4_RHOBT ;
ALN/Q_length_ratio=0.787 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula baltica SWK14 GN=RBSWK_06478 PE=4 SV=1 ;
EVALUE=4e-71 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K5DCT7|K5DCT7_RHOBT ;
ALN/Q_length_ratio=0.787 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula baltica SH28 GN=RBSH_04091 PE=4 SV=1 ;
EVALUE=4e-70 ; Q/S_length_ratio=0.994"
/note="Pfam_scan:hit_1 (117..475); Pfam:PF04966.7:OprB;
Pfam_type:Family;HMM_aln_Length:367; HMM_Length:371;
EVALUE:4.1e-29; BITSCORE: 101.8"
/note="GO_domain:GO:0005575"
/note="GO_domain:GO:0006810"
/note="GO_domain:GO:0003674"
BEGIN
1 MRADFRQVVI AFVGLLFSGA FAIGQYLPTV TPIPNSVPVQ ESQAPAQGTT APATPEPAGN
61 VAAEPAPPTN PYAGDLFSRA RLTGDWWGAR SALANRGLTF DLFATQFYQG VAAGGNERSW
121 EYGGKLDYLF NVDGQKLGLW KGFFLNMHTE TRYGTDVNGI DGLIAPSNIA MNFPDSTTSI
181 TSITGLKLTQ ALSENFAIYA GKINTLDEYP LRYSPGLGTN KPGLEGFQNT SLVFNPIVAR
241 TIPYAAAGVG FAVLKDLEPV FTFTVFDPEE RATSGLQNLY DRGVVLVPDL VLRTKFLDRP
301 GSYNFGGTYS TAKYRSFDPA AYLNIPFLRS LVARNPVTPL ETGSWSVYAN FYQSIWVDEL
361 DEKRNWGLFG QFGISDGNPN PVRFVANGGI GGRSMIPGRK LDTFGVGYYY LGLSDNFKAL
421 ARPFAPQRDE HGVELFYNYA ITPWCRLTYD FQVATPSTIN VNTTITTGLR LQILF
//