LOCUS VTR94136.1 403 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana integrase-recombinase protein : Integrase-
recombinase protein OS=Rhodopirellula sallentina SM41
GN=RSSM_04495 PE=4 SV=1: Phage_integrase protein.
ACCESSION LR593886-3437
PROTEIN_ID VTR94136.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_35780"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|M5TYC8|M5TYC8_9PLAN ;
ALN/Q_length_ratio=1.007 ;
DESCRIPTION=Integrase-recombinase protein
OS=Rhodopirellula sallentina SM41 GN=RSSM_04495 PE=4 SV=1
; EVALUE=5e-33 ; Q/S_length_ratio=0.960"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DJ84|L0DJ84_SINAD ;
ALN/Q_length_ratio=0.888 ; DESCRIPTION=Site-specific
recombinase XerD OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4560
PE=4 SV=1 ; EVALUE=3e-31 ; Q/S_length_ratio=1.041"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|X1LRV7|X1LRV7_9ZZZZ ;
ALN/Q_length_ratio=0.677 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S06H3_L02821 (Fragment) OS=marine
sediment metagenome GN=S06H3_17168 PE=4 SV=1 ;
EVALUE=5e-22 ; Q/S_length_ratio=1.476"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5R6X7|M5R6X7_9PLAN ;
ALN/Q_length_ratio=1.012 ; DESCRIPTION=Integrase,
catalytic core, phage domain protein OS=Rhodopirellula
maiorica SM1 GN=RMSM_07826 PE=4 SV=1 ; EVALUE=2e-21 ;
Q/S_length_ratio=0.759"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5TSZ5|M5TSZ5_9PLAN ;
ALN/Q_length_ratio=1.102 ; DESCRIPTION=Site-specific
recombinase, phage integrase family protein
OS=Rhodopirellula sallentina SM41 GN=RSSM_06380 PE=4 SV=1
; EVALUE=5e-21 ; Q/S_length_ratio=0.760"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|X1UF95|X1UF95_9ZZZZ ;
ALN/Q_length_ratio=0.541 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S12H4_S13206 (Fragment) OS=marine
sediment metagenome GN=S12H4_44744 PE=4 SV=1 ;
EVALUE=1e-13 ; Q/S_length_ratio=1.574"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|X0SNN7|X0SNN7_9ZZZZ ;
ALN/Q_length_ratio=0.390 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L00378 OS=marine sediment
metagenome GN=S01H1_04139 PE=4 SV=1 ; EVALUE=2e-13 ;
Q/S_length_ratio=1.429"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5TZQ5|M5TZQ5_9PLAN ;
ALN/Q_length_ratio=0.811 ;
DESCRIPTION=Integrase-recombinase protein
OS=Rhodopirellula sallentina SM41 GN=RSSM_03803 PE=4 SV=1
; EVALUE=3e-13 ; Q/S_length_ratio=0.783"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|X0T3K4|X0T3K4_9ZZZZ ;
ALN/Q_length_ratio=0.566 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L08131 (Fragment) OS=marine
sediment metagenome GN=S01H1_18596 PE=4 SV=1 ;
EVALUE=4e-13 ; Q/S_length_ratio=1.240"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5U9Y1|M5U9Y1_9PLAN ;
ALN/Q_length_ratio=0.980 ;
DESCRIPTION=Integrase-recombinase protein
OS=Rhodopirellula sallentina SM41 GN=RSSM_00409 PE=4 SV=1
; EVALUE=6e-13 ; Q/S_length_ratio=0.738"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M2AG18|M2AG18_9PLAN ;
ALN/Q_length_ratio=0.811 ; DESCRIPTION=Site-specific
recombinase, phage integrase family protein (Fragment)
OS=Rhodopirellula europaea 6C GN=RE6C_03211 PE=4 SV=1 ;
EVALUE=1e-12 ; Q/S_length_ratio=0.955"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M5SAG3|M5SAG3_9PLAN ;
ALN/Q_length_ratio=0.861 ;
DESCRIPTION=Integrase-recombinase protein
OS=Rhodopirellula europaea SH398 GN=RESH_00956 PE=4 SV=1 ;
EVALUE=4e-12 ; Q/S_length_ratio=0.867"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|X0XHQ9|X0XHQ9_9ZZZZ ;
ALN/Q_length_ratio=0.375 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S28344 (Fragment) OS=marine
sediment metagenome GN=S01H1_65329 PE=4 SV=1 ;
EVALUE=7e-12 ; Q/S_length_ratio=1.606"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q7UJ13|Q7UJ13_RHOBA ;
ALN/Q_length_ratio=1.084 ; DESCRIPTION=Probable
integrase-recombinase protein OS=Rhodopirellula baltica
(strain SH1) GN=RB12202 PE=4 SV=1 ; EVALUE=1e-11 ;
Q/S_length_ratio=0.745"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|C7LSP4|C7LSP4_DESBD ;
ALN/Q_length_ratio=0.903 ; DESCRIPTION=Integrase family
protein OS=Desulfomicrobium baculatum (strain DSM 4028 /
VKM B-1378) GN=Dbac_1337 PE=4 SV=1 ; EVALUE=1e-11 ;
Q/S_length_ratio=1.028"
/note="Pfam_scan:hit_1 (210..392);
Pfam:PF00589.17:Phage_integrase;
Pfam_type:Family;HMM_aln_Length:146; HMM_Length:173;
EVALUE:3.2e-19; BITSCORE: 69.2"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MGRVFQPQYW KNMPDGSRAK VKTKAWYAEW QVAGETKRKK IGPRAIANAA LAKFEDSEAR
61 RRAGLPDLNA EARLLAAPLA DLATEYLEVL AARDTCDEYR KTTSAQITRM LSECRWRVWT
121 DIEPNGFVRF LGRLRDTPRV KKATGAAKGK RAPRATDKVL ADGCGPATLN SYMRAAKAFA
181 RWLADRFHTT SPLRTLKPYP EAVDVRRSNR ILTDDELGKL LIATGAATRK GTATVWGKDR
241 AMLYRIAAYS GLRAGELSVL TPLHFTLDAE PPVITVQAAD AKNKRTEPIP LPQHVVELLR
301 PWLAGRGPKE KLFPGNWAQC RKQCQWLAAD LKRAGVDATN DKGQPVTFHS LKRRFVVRLI
361 QAGAKIHEVR RMARHADIST TLKHYAEDNL KELGALANRL ALV
//