LOCUS VTR94063.1 398 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana phage integrase : Integrase family
protein OS=Nitrolancea hollandica Lb GN=NITHO_2230014
PE=4 SV=1: Phage_int_SAM_3: Phage_integrase protein.
ACCESSION LR593886-3364
PROTEIN_ID VTR94063.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_36510"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|I4EF96|I4EF96_9CHLR ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Integrase family
protein OS=Nitrolancea hollandica Lb GN=NITHO_2230014 PE=4
SV=1 ; EVALUE=4e-70 ; Q/S_length_ratio=1.045"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|I4EHH7|I4EHH7_9CHLR ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Integrase family
protein OS=Nitrolancea hollandica Lb GN=NITHO_3110012 PE=4
SV=1 ; EVALUE=5e-69 ; Q/S_length_ratio=1.045"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|Q2RHJ2|Q2RHJ2_MOOTA ;
ALN/Q_length_ratio=0.937 ; DESCRIPTION=Phage integrase
OS=Moorella thermoacetica (strain ATCC 39073) GN=Moth_1796
PE=1 SV=1 ; EVALUE=3e-66 ; Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|I4ELJ5|I4ELJ5_9CHLR ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Phage integrase
OS=Nitrolancea hollandica Lb GN=NITHO_5160001 PE=4 SV=1 ;
EVALUE=4e-63 ; Q/S_length_ratio=1.045"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D6TPP0|D6TPP0_9CHLR ;
ALN/Q_length_ratio=0.907 ; DESCRIPTION=Integrase family
protein OS=Ktedonobacter racemifer DSM 44963 GN=Krac_6882
PE=4 SV=1 ; EVALUE=9e-61 ; Q/S_length_ratio=1.053"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F6CPQ5|F6CPQ5_DESK7 ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=Integrase family
protein OS=Desulfotomaculum kuznetsovii (strain DSM 6115 /
VKM B-1805 / 17) GN=Desku_1060 PE=4 SV=1 ; EVALUE=1e-60 ;
Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q1ATW8|Q1ATW8_RUBXD ;
ALN/Q_length_ratio=0.905 ; DESCRIPTION=Phage integrase
OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
GN=Rxyl_2219 PE=4 SV=1 ; EVALUE=2e-60 ;
Q/S_length_ratio=1.053"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|K4LWM3|K4LWM3_THEPS ;
ALN/Q_length_ratio=0.912 ; DESCRIPTION=Tyrosine
recombinase, xerC-like protein OS=Thermacetogenium phaeum
(strain ATCC BAA-254 / DSM 12270 / PB) GN=Tph_c21970 PE=4
SV=1 ; EVALUE=6e-58 ; Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|I7LIL6|I7LIL6_9CLOT ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Phage integrase
OS=Caloramator australicus RC3 GN=CAAU_0978 PE=4 SV=1 ;
EVALUE=2e-57 ; Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|K6P087|K6P087_9FIRM ;
ALN/Q_length_ratio=0.935 ; DESCRIPTION=Site-specific
recombinase XerD OS=Thermaerobacter subterraneus DSM 13965
GN=ThesuDRAFT_02227 PE=4 SV=1 ; EVALUE=1e-56 ;
Q/S_length_ratio=1.039"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A023X4M9|A0A023X4M9_9ACTN ;
ALN/Q_length_ratio=0.915 ; DESCRIPTION=Phage integrase
family OS=Rubrobacter radiotolerans GN=RradSPS_2020 PE=4
SV=1 ; EVALUE=9e-56 ; Q/S_length_ratio=1.061"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|D1C8V1|D1C8V1_SPHTD ;
ALN/Q_length_ratio=0.930 ; DESCRIPTION=Integrase family
protein OS=Sphaerobacter thermophilus (strain DSM 20745 /
S 6022) GN=Sthe_2831 PE=4 SV=1 ; EVALUE=9e-56 ;
Q/S_length_ratio=1.059"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|R6MXZ7|R6MXZ7_9CLOT ;
ALN/Q_length_ratio=0.912 ; DESCRIPTION=Putative
site-specific recombinase OS=Clostridium leptum CAG:27
GN=BN578_01696 PE=4 SV=1 ; EVALUE=7e-55 ;
Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|W9D6M4|W9D6M4_9ACTO ;
ALN/Q_length_ratio=0.932 ; DESCRIPTION=Site-specific
recombinase XerD OS=Frankia sp. CcI6 GN=CcI6DRAFT_00513
PE=4 SV=1 ; EVALUE=2e-54 ; Q/S_length_ratio=0.950"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|I4EM97|I4EM97_9CHLR ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=Integrase family
protein OS=Nitrolancea hollandica Lb GN=NITHO_5780001 PE=4
SV=1 ; EVALUE=3e-54 ; Q/S_length_ratio=1.053"
/note="Pfam_scan:hit_1 (76..134);
Pfam:PF14659.1:Phage_int_SAM_3;
Pfam_type:Domain;HMM_aln_Length:53; HMM_Length:58;
EVALUE:6.8e-07; BITSCORE: 29.4"
/note="Pfam_scan:hit_2 (187..385);
Pfam:PF00589.17:Phage_integrase;
Pfam_type:Family;HMM_aln_Length:169; HMM_Length:173;
EVALUE:2.3e-27; BITSCORE: 95.7"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MARKTAKSRR GRGEGGIRFR EEKNLWEARL SLGYGPDGKR VRKTVYGADK AEVSEKLRKL
61 QADHDAGRLV ETEEITTREY LTRWLNNTAK ESVGVATWER YRQLVEIYLV PILGGVKLHK
121 LRPLHVEQCY AAMKDGTADR KPAGADTRKS AGVILSAALK HAVQMKLIPH NPAADVKKAK
181 PAVREMAFLT QPQAKRWLTT AKRNQNYALF AAALGSGARQ GELLGLTWPD LDLERGTLDV
241 RRALAQVKGK FILKEPKSRT SRRTITLPTF AVDALRDHRA AALKGGRITG PVFCTRTMGY
301 LDRKNVLRAC RTITTRTNEA EQGRAVASNE QPDLIPQSLR FHDLRHTHAT GLIAAGSSIK
361 AISRRLGHSD ISITLKVYGH LLPDDDEKLA GQANALFG
//