LOCUS VTR93950.1 521 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana 3-dehydroquinate dehydratase : Shikimate
dehydrogenase (NADP(+)) OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=Psta_4018 PE=3 SV=1:
DHquinase_I: Shikimate_dh_N: Shikimate_DH protein.
ACCESSION LR593886-3251
PROTEIN_ID VTR93950.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_37640"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D2R261|D2R261_PIRSD ;
ALN/Q_length_ratio=0.939 ; DESCRIPTION=Shikimate
dehydrogenase (NADP(+)) OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=Psta_4018 PE=3 SV=1 ;
EVALUE=1e-152 ; Q/S_length_ratio=1.053"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A6C6X1|A6C6X1_9PLAN ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=Shikimate
dehydrogenase (NADP(+)) OS=Planctomyces maris DSM 8797
GN=PM8797T_03785 PE=3 SV=1 ; EVALUE=1e-151 ;
Q/S_length_ratio=1.046"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D5SYE1|D5SYE1_PLAL2 ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Shikimate
dehydrogenase (NADP(+)) OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_1839 PE=3 SV=1 ; EVALUE=1e-151 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|K5DCP4|K5DCP4_RHOBT ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Shikimate
dehydrogenase (NADP(+)) OS=Rhodopirellula baltica SH28
GN=RBSH_04544 PE=3 SV=1 ; EVALUE=1e-150 ;
Q/S_length_ratio=1.050"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q7UQ72|Q7UQ72_RHOBA ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Shikimate
dehydrogenase (NADP(+)) OS=Rhodopirellula baltica (strain
SH1) GN=RB6488 PE=3 SV=1 ; EVALUE=1e-150 ;
Q/S_length_ratio=1.050"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M5SA16|M5SA16_9PLAN ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Shikimate
dehydrogenase (NADP(+)) OS=Rhodopirellula europaea SH398
GN=RESH_01142 PE=3 SV=1 ; EVALUE=1e-150 ;
Q/S_length_ratio=1.050"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M2AY37|M2AY37_9PLAN ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Shikimate
dehydrogenase (NADP(+)) OS=Rhodopirellula europaea 6C
GN=RE6C_01688 PE=3 SV=1 ; EVALUE=1e-150 ;
Q/S_length_ratio=1.050"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A4A187|A4A187_9PLAN ;
ALN/Q_length_ratio=0.933 ; DESCRIPTION=Shikimate
dehydrogenase (NADP(+)) OS=Blastopirellula marina DSM 3645
GN=DSM3645_19992 PE=3 SV=1 ; EVALUE=1e-150 ;
Q/S_length_ratio=1.053"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|L7CCM1|L7CCM1_RHOBT ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Shikimate
dehydrogenase (NADP(+)) OS=Rhodopirellula baltica SWK14
GN=RBSWK_04269 PE=3 SV=1 ; EVALUE=1e-150 ;
Q/S_length_ratio=1.050"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F2AVW2|F2AVW2_RHOBT ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Shikimate
dehydrogenase (NADP(+)) OS=Rhodopirellula baltica WH47
GN=RBWH47_04250 PE=3 SV=1 ; EVALUE=1e-150 ;
Q/S_length_ratio=1.050"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5TKH6|M5TKH6_9PLAN ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Shikimate
dehydrogenase (NADP(+)) OS=Rhodopirellula sp. SWK7
GN=RRSWK_01415 PE=3 SV=1 ; EVALUE=1e-147 ;
Q/S_length_ratio=1.050"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|E8R0P8|E8R0P8_ISOPI ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=Shikimate
dehydrogenase (NADP(+)) OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=Isop_0641 PE=3 SV=1 ;
EVALUE=1e-146 ; Q/S_length_ratio=0.989"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F0SN73|F0SN73_PLABD ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=Shikimate
dehydrogenase (NADP(+)) OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=Plabr_3505 PE=3 SV=1 ; EVALUE=1e-143 ;
Q/S_length_ratio=1.050"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M5REW6|M5REW6_9PLAN ;
ALN/Q_length_ratio=0.921 ; DESCRIPTION=Shikimate
dehydrogenase (NADP(+)) OS=Rhodopirellula maiorica SM1
GN=RMSM_05444 PE=3 SV=1 ; EVALUE=1e-141 ;
Q/S_length_ratio=1.079"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5U6R4|M5U6R4_9PLAN ;
ALN/Q_length_ratio=0.921 ; DESCRIPTION=Shikimate
dehydrogenase (NADP(+)) OS=Rhodopirellula sallentina SM41
GN=RSSM_01435 PE=3 SV=1 ; EVALUE=1e-139 ;
Q/S_length_ratio=1.079"
/note="Pfam_scan:hit_1 (6..215);
Pfam:PF01487.10:DHquinase_I;
Pfam_type:Domain;HMM_aln_Length:219; HMM_Length:224;
EVALUE:3.9e-41; BITSCORE: 141.1"
/note="Pfam_scan:hit_2 (228..310);
Pfam:PF08501.6:Shikimate_dh_N;
Pfam_type:Domain;HMM_aln_Length:82; HMM_Length:83;
EVALUE:2.2e-21; BITSCORE: 75.7"
/note="Pfam_scan:hit_3 (338..477);
Pfam:PF01488.15:Shikimate_DH;
Pfam_type:Family;HMM_aln_Length:79; HMM_Length:135;
EVALUE:7.1e-14; BITSCORE: 52.0"
/note="GO_domain:GO:0016491"
/note="GO_domain:GO:0016829"
/note="GO_domain:GO:0006520"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="Enzyme_Code:EC:1.1.1.25"
/note="Enzyme_Code:EC:4.2.1.10"
/note="Enzyme_Code:EC:1.1.1.282"
BEGIN
1 MSSDRVLVVI GRTRHKMVVA ELQEAVKRGA KFVELRLDFL AKAVDFKRLA PLKQCPWVAT
61 LRRPSDGGRF PGTEPERMMI LRQAIVSGAF EWVDLETDIA DSVPRFGPVK RIVSYHNTTE
121 TPANLDEIYA NMLKQDADVY KLAVAAQSPE DVGRVLQLQR TAPKPTVAFC MGDIGQPTRF
181 LALKFGAPWI YAAFNKERGI APGLPSFDEF RTTYPVQNVN ADTQVFGVLG DPVGHSLSPL
241 LHNHMYKKLG VNALYLPFRV PRGQLPQALE SYDQIPLRGY SVTIPHKEAA ASIARESEPN
301 VQVTGSANTL VRRDDGKFSA ANTDFAAAAD SLKAFLAERA KTGPSTQLSQ LSILILGAGG
361 AARSIAYAFH REGAQITIAA RTYERAQKLA EDVKCKAVDW HARHSITFDV LINCTPVGMH
421 PNVDESPCHF SVLKPGTIVF DTIYTPETTL LIREARARGC DTITGVDMFV RQAARQIELF
481 TNLTPDTEVM RLIMRKALSP LTKAFDEETE PKPAPPEETE E
//