LOCUS VTR93923.1 843 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana type ii and iii secretion system protein
: Tetratricopeptide TPR_2 repeat protein OS=Pirellula
staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=
Psta_2170 PE=4 SV=1: TPR_14: Secretin: Secretin_N: Secretin
protein.
ACCESSION LR593886-3224
PROTEIN_ID VTR93923.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_37910"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D2R2K3|D2R2K3_PIRSD ;
ALN/Q_length_ratio=0.197 ; DESCRIPTION=Tetratricopeptide
TPR_2 repeat protein OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=Psta_2170 PE=4 SV=1 ;
EVALUE=9e-15 ; Q/S_length_ratio=1.925"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A4A2S0|A4A2S0_9PLAN ;
ALN/Q_length_ratio=0.192 ; DESCRIPTION=Probable O-linked
GlcNAc transferase OS=Blastopirellula marina DSM 3645
GN=DSM3645_06394 PE=4 SV=1 ; EVALUE=2e-10 ;
Q/S_length_ratio=2.618"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A6C5P5|A6C5P5_9PLAN ;
ALN/Q_length_ratio=0.196 ; DESCRIPTION=TPR repeat
OS=Planctomyces maris DSM 8797 GN=PM8797T_18649 PE=4 SV=1
; EVALUE=7e-09 ; Q/S_length_ratio=2.659"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D2R0W7|D2R0W7_PIRSD ;
ALN/Q_length_ratio=0.095 ; DESCRIPTION=Type II and III
secretion system protein OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=Psta_2041 PE=4 SV=1 ;
EVALUE=1e-07 ; Q/S_length_ratio=0.646"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L0DN65|L0DN65_SINAD ;
ALN/Q_length_ratio=0.140 ; DESCRIPTION=Tetratricopeptide
repeat protein OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6005
PE=4 SV=1 ; EVALUE=5e-07 ; Q/S_length_ratio=2.651"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|I3YCQ8|I3YCQ8_THIV6 ;
ALN/Q_length_ratio=0.335 ; DESCRIPTION=General secretion
pathway protein D OS=Thiocystis violascens (strain ATCC
17096 / DSM 198 / 6111) GN=Thivi_2865 PE=3 SV=1 ;
EVALUE=1e-06 ; Q/S_length_ratio=1.145"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A6CEJ3|A6CEJ3_9PLAN ;
ALN/Q_length_ratio=0.164 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_08219
PE=4 SV=1 ; EVALUE=2e-06 ; Q/S_length_ratio=1.979"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D5SR20|D5SR20_PLAL2 ;
ALN/Q_length_ratio=0.102 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_0641 PE=4 SV=1 ;
EVALUE=6e-06 ; Q/S_length_ratio=0.538"
/note="Pfam_scan:hit_1 (91..134); Pfam:PF13428.1:TPR_14;
Pfam_type:Repeat;HMM_aln_Length:40; HMM_Length:44;
EVALUE:3.5e-05; BITSCORE: 24.0"
/note="Pfam_scan:hit_2 (375..534);
Pfam:PF00263.16:Secretin;
Pfam_type:Family;HMM_aln_Length:127; HMM_Length:165;
EVALUE:6.2e-09; BITSCORE: 35.4"
/note="Pfam_scan:hit_3 (576..640);
Pfam:PF03958.12:Secretin_N;
Pfam_type:Domain;HMM_aln_Length:80; HMM_Length:82;
EVALUE:9.1e-08; BITSCORE: 32.1"
/note="Pfam_scan:hit_4 (686..807);
Pfam:PF00263.16:Secretin;
Pfam_type:Family;HMM_aln_Length:113; HMM_Length:165;
EVALUE:9.6e-09; BITSCORE: 34.8"
/note="GO_domain:GO:0006810"
/note="GO_domain:GO:0003674"
BEGIN
1 MRLRTLLAIV AVLFALPAFS RAKNQPVPLP PAATMPQTPG KQASADALVA ISDVRLDAAT
61 DEKIGSTNKG ALLELASEGY LKALKQEPKH KGALLGLARV HARADEKQKA VEAYKAYLTL
121 YPTDADAAHE LAVAHARWKD WAGACSWCEF ALKIAPDNHN VKKTHGFCLA CAGKRDEAFA
181 VLCQIMPEAQ ARHNLAGVLN HMGHTNASKT QLQLAVKADP NFAPARDLLN KLEGGAPAPA
241 PRALPEMVTR VFGVMDLVTP AIGSEATATY RKNTEELVKL VTGMVRPYSW KEAGGRGTAE
301 YFDVGTSLVV QNTPDVLQEV SDLLEALHRL APTSVSVCFE VRVLKVPVGF CEKAGVKVAR
361 DTTLTPVQFQ ALLKAAQENR DANVLQFPKV TAIDGQTAHS KIGEEQSFVT GLEIMKVKGQ
421 NVYVPKNVAI FLGDVLALQG RISAEGNYVY VQADLAHTHL AGPVELAPIT TQITPIFEGG
481 AMGNPVPLTQ FLQVPDVRKE RIEKTAVVPT GATLVIGGWK EVEVPKDKNA KPGKEFEMVA
541 LATVSVIKDV KSALDSALKS GAPPQPVAAP AVNNKNAVYK LRNVSAVDAV RAIEAYLSDK
601 KLSATVIAEP VSNSVLVSAH PEPFRWVMDT LAAIDKAPKQ VAVRAMVVQV PRGFVAQSGL
661 TVGTTEGTNW TLSPRESRML TELLRAAKER GECNVLTRLQ ICVCDNQTGY AQVGQTPAAV
721 VPASAKAEAQ IGITQNAITL CVTPRIAPDD KSVLLRTNLQ IAEVNNVTPA NAPASIHRRT
781 LETTASVAFG GTFVAVCGSH QTDHSLTGAI RWLWGNRYET LVILTPEPVA SGPEVRSAGW
841 FTK
//