LOCUS VTR93890.1 509 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana radical sam protein : Radical SAM domain
protein OS=Pseudonocardia dioxanivorans (strain ATCC 55486
/ DSM 44775 / JCM 13855 / CB1190) GN=Psed_0385 PE=4 SV=
1: B12-binding protein.
ACCESSION LR593886-3191
PROTEIN_ID VTR93890.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_38240"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|F4CIR2|F4CIR2_PSEUX ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Radical SAM domain
protein OS=Pseudonocardia dioxanivorans (strain ATCC 55486
/ DSM 44775 / JCM 13855 / CB1190) GN=Psed_0385 PE=4 SV=1 ;
EVALUE=1e-157 ; Q/S_length_ratio=0.959"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|G8T982|G8T982_NIAKG ;
ALN/Q_length_ratio=0.963 ; DESCRIPTION=Radical SAM domain
protein OS=Niastella koreensis (strain DSM 17620 / KACC
11465 / GR20-10) GN=Niako_1685 PE=4 SV=1 ; EVALUE=2e-89 ;
Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|G8TIT7|G8TIT7_NIAKG ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=Radical SAM domain
protein OS=Niastella koreensis (strain DSM 17620 / KACC
11465 / GR20-10) GN=Niako_0029 PE=4 SV=1 ; EVALUE=5e-86 ;
Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A085WRL4|A0A085WRL4_9DELT ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Uncharacterized
protein OS=Hyalangium minutum GN=DB31_5369 PE=4 SV=1 ;
EVALUE=6e-81 ; Q/S_length_ratio=0.960"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A085W911|A0A085W911_9DELT ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Uncharacterized
protein OS=Enhygromyxa salina GN=DB30_1619 PE=4 SV=1 ;
EVALUE=6e-81 ; Q/S_length_ratio=0.960"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|H8KXX7|H8KXX7_SOLCM ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=Uncharacterized
protein OS=Solitalea canadensis (strain ATCC 29591 / DSM
3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) GN=Solca_0522
PE=4 SV=1 ; EVALUE=9e-80 ; Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|W0RNT3|W0RNT3_9BACT ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=Elongator protein
3/MiaB/NifB OS=Gemmatimonadetes bacterium KBS708
GN=J421_5124 PE=4 SV=1 ; EVALUE=5e-77 ;
Q/S_length_ratio=0.971"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|C7JDM1|C7JDM1_ACEP3 ;
ALN/Q_length_ratio=0.591 ; DESCRIPTION=Radical
S-adenosylmethionine (SAM) protein OS=Acetobacter
pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153)
GN=APA01_05150 PE=4 SV=1 ; EVALUE=2e-20 ;
Q/S_length_ratio=1.139"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|C7L7X3|C7L7X3_ACEPA ;
ALN/Q_length_ratio=0.591 ; DESCRIPTION=Radical
S-adenosylmethionine (SAM) protein OS=Acetobacter
pasteurianus IFO 3283-12 GN=APA12_05150 PE=4 SV=1 ;
EVALUE=2e-20 ; Q/S_length_ratio=1.139"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|S6DC10|S6DC10_ACEPA ;
ALN/Q_length_ratio=0.591 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Acetobacter pasteurianus 386B
GN=APA386B_2007 PE=4 SV=1 ; EVALUE=2e-20 ;
Q/S_length_ratio=1.139"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|C7K599|C7K599_ACEPA ;
ALN/Q_length_ratio=0.591 ; DESCRIPTION=Radical
S-adenosylmethionine (SAM) protein OS=Acetobacter
pasteurianus IFO 3283-22 GN=APA22_05150 PE=4 SV=1 ;
EVALUE=2e-20 ; Q/S_length_ratio=1.139"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|C7JV07|C7JV07_ACEPA ;
ALN/Q_length_ratio=0.591 ; DESCRIPTION=Radical
S-adenosylmethionine (SAM) protein OS=Acetobacter
pasteurianus IFO 3283-07 GN=APA07_05150 PE=4 SV=1 ;
EVALUE=2e-20 ; Q/S_length_ratio=1.139"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|H1UIK5|H1UIK5_ACEPA ;
ALN/Q_length_ratio=0.591 ; DESCRIPTION=Radical
S-adenosylmethionine protein OS=Acetobacter pasteurianus
NBRC 101655 GN=APT_1976 PE=4 SV=1 ; EVALUE=2e-20 ;
Q/S_length_ratio=1.041"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|C7KEG8|C7KEG8_ACEPA ;
ALN/Q_length_ratio=0.591 ; DESCRIPTION=Radical
S-adenosylmethionine (SAM) protein OS=Acetobacter
pasteurianus IFO 3283-26 GN=APA26_05150 PE=4 SV=1 ;
EVALUE=2e-20 ; Q/S_length_ratio=1.139"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|C7KNT4|C7KNT4_ACEPA ;
ALN/Q_length_ratio=0.591 ; DESCRIPTION=Radical
S-adenosylmethionine (SAM) protein OS=Acetobacter
pasteurianus IFO 3283-32 GN=APA32_05150 PE=4 SV=1 ;
EVALUE=2e-20 ; Q/S_length_ratio=1.139"
/note="Pfam_scan:hit_1 (19..128);
Pfam:PF02310.14:B12-binding;
Pfam_type:Domain;HMM_aln_Length:111; HMM_Length:121;
EVALUE:3.3e-10; BITSCORE: 39.8"
/note="GO_domain:GO:0043167"
BEGIN
1 MNVGVIELIA YTVPPEWRGH TVAVAMRKVL YSVMPQVVAA WCRRRGHRTH YATYYGQADP
61 VRLLPDDLDI VFISATTQAS GLAYALARYY RGRGVRTVLG GPHAKCFPAD ALRFFDIVVG
121 ECDEELVGDI LAQRFDPPAS VSSRRPRALP GVAERFPDIV TAGFRPGRRF GFNVVAVFSS
181 LGCPYTCEFC TEWNSRYAPL LADDLAADLA FVRRRDRRAI VAFHDPNFAV RFDETMDVME
241 RDGERPNRYV MECSLSVLRD DRLPRLARTN CLYVAPGVES WFDFGNKSLA GEKQGAAKLD
301 FVAERFRALR RFVPGLQANF LFGTDADRGT EPVELTIDFV RRLPFVWPNV NVPTPYGATP
361 LFDRYRADGR ILAGMPLTCY CAPYLVSTLR HYDPVAFYRH LVRIQTAITS WAALARRVAP
421 AAPFAIRFAH AVQTLSFREQ AAETRAILRL LETDRGFRAF HEGERVPVPE FYQRHVENRL
481 GRYASLFPRP DRTPVLGPGV ARANVATLN
//