LOCUS VTR93887.1 337 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dtdp-glucose -dehydratase : Marine
sediment metagenome DNA, contig: S01H1_L05958 OS=marine
sediment metagenome GN=S01H1_14926 PE=4 SV=1: Epimerase
protein.
ACCESSION LR593886-3188
PROTEIN_ID VTR93887.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_38270"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|X0S1X9|X0S1X9_9ZZZZ ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L05958 OS=marine sediment
metagenome GN=S01H1_14926 PE=4 SV=1 ; EVALUE=1e-136 ;
Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|Q0YTV4|Q0YTV4_9CHLB ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=NAD-dependent
epimerase/dehydratase OS=Chlorobium ferrooxidans DSM 13031
GN=CferDRAFT_1805 PE=4 SV=1 ; EVALUE=1e-130 ;
Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E6VHF7|E6VHF7_RHOPX ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=NAD-dependent
epimerase/dehydratase OS=Rhodopseudomonas palustris
(strain DX-1) GN=Rpdx1_1424 PE=4 SV=1 ; EVALUE=1e-130 ;
Q/S_length_ratio=0.977"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q6N2X3|Q6N2X3_RHOPA ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=Putative
dTDP-glucose 4,6-dehydratase OS=Rhodopseudomonas palustris
(strain ATCC BAA-98 / CGA009) GN=RPA3925 PE=4 SV=1 ;
EVALUE=1e-127 ; Q/S_length_ratio=0.977"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|B3QIY8|B3QIY8_RHOPT ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=NAD-dependent
epimerase/dehydratase OS=Rhodopseudomonas palustris
(strain TIE-1) GN=Rpal_4448 PE=4 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=0.977"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Q2ITF6|Q2ITF6_RHOP2 ;
ALN/Q_length_ratio=0.985 ; DESCRIPTION=dTDP-glucose
4,6-dehydratase OS=Rhodopseudomonas palustris (strain
HaA2) GN=RPB_3810 PE=4 SV=1 ; EVALUE=1e-125 ;
Q/S_length_ratio=0.977"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A076GZM9|A0A076GZM9_9SYNE ;
ALN/Q_length_ratio=0.997 ; DESCRIPTION=Uncharacterized
protein OS=Synechococcus sp. KORDI-100 GN=KR100_01400 PE=4
SV=1 ; EVALUE=1e-122 ; Q/S_length_ratio=0.991"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|J2L8A3|J2L8A3_9BURK ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=dTDP-D-glucose
4,6-dehydratase OS=Herbaspirillum sp. CF444 GN=PMI16_04702
PE=4 SV=1 ; EVALUE=1e-122 ; Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|K2C665|K2C665_9BACT ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=Uncharacterized
protein OS=uncultured bacterium GN=ACD_46C00724G0012 PE=4
SV=1 ; EVALUE=1e-118 ; Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|I3CY92|I3CY92_9BURK ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=NAD-dependent
epimerase/dehydratase OS=Herbaspirillum sp. GW103
GN=GWL_06190 PE=4 SV=1 ; EVALUE=1e-118 ;
Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|U1JTN8|U1JTN8_9GAMM ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=NAD-dependent
epimerase/dehydratase OS=Pseudoalteromonas citrea NCIMB
1889 GN=PCIT_04163 PE=4 SV=1 ; EVALUE=1e-113 ;
Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A4YY85|A4YY85_BRASO ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Putative
dTDP-glucose 4,6-dehydratase OS=Bradyrhizobium sp. (strain
ORS278) GN=BRADO5168 PE=4 SV=1 ; EVALUE=1e-112 ;
Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A2BSH5|A2BSH5_PROMS ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=dTDP-D-glucose
4,6-dehydratase OS=Prochlorococcus marinus (strain AS9601)
GN=rfbB PE=4 SV=1 ; EVALUE=1e-111 ;
Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|U1LE65|U1LE65_PSEO7 ;
ALN/Q_length_ratio=0.953 ; DESCRIPTION=dTDP-glucose
4,6-dehydratase OS=Pseudoalteromonas piscicida JCM 20779
GN=PPIS_08161 PE=4 SV=1 ; EVALUE=1e-111 ;
Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|U1LJK5|U1LJK5_9GAMM ;
ALN/Q_length_ratio=0.953 ; DESCRIPTION=NAD-dependent
epimerase/dehydratase OS=Pseudoalteromonas rubra ATCC
29570 GN=PRUB_23506 PE=4 SV=1 ; EVALUE=1e-110 ;
Q/S_length_ratio=1.024"
/note="Pfam_scan:hit_1 (13..250);
Pfam:PF01370.16:Epimerase;
Pfam_type:Family;HMM_aln_Length:229; HMM_Length:236;
EVALUE:3e-42; BITSCORE: 144.6"
/note="GO_domain:GO:0016829"
BEGIN
1 MTAPRMGAGV ERFCVIGSNS FSGASFVASA LKAGAEVLGI SRSPEADPVF LPYRWADASR
61 FTFRQLDLNR DLNAIDAALR EFRPDFVVNF AAQGMVAQSW ANPEHWYRTN TVAMAGLHER
121 LRTMDFLKKF VQASTPEVYG NTSGLVSENA PFNPSTPYAI SKAACDMNLL AYQRAYGFPV
181 VFTRSANVCG PAQALYRIIP KTVLCVLTGK RLRLEGGGTS VRSFIHIDDV SDATLRAARD
241 GAPGSVFHLS TPLNQTIRSV VEEVCRQLGA PFEDSVEMVG ARLGQDAAYL LDSTAARTKL
301 EWEPRRGIAD AIADTIAWTK KNLDTLRSAP AEYIHKE
//