LOCUS VTR93831.1 1090 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rna binding s1 domain protein : Transcriptional
accessory protein OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0680
PE=4 SV=1: Tex_N: HHH_3: S1 protein.
ACCESSION LR593886-3132
PROTEIN_ID VTR93831.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_38830"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0D774|L0D774_SINAD ;
ALN/Q_length_ratio=0.353 ; DESCRIPTION=Transcriptional
accessory protein OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_0680 PE=4 SV=1 ; EVALUE=1e-144 ;
Q/S_length_ratio=0.940"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A6C5P8|A6C5P8_9PLAN ;
ALN/Q_length_ratio=0.374 ; DESCRIPTION=Ribosomal protein
S1-like RNA-binding domain OS=Planctomyces maris DSM 8797
GN=PM8797T_18664 PE=4 SV=1 ; EVALUE=1e-134 ;
Q/S_length_ratio=1.316"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E8R4F0|E8R4F0_ISOPI ;
ALN/Q_length_ratio=0.331 ; DESCRIPTION=Tex-like protein
OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 /
IS1B) GN=Isop_3181 PE=4 SV=1 ; EVALUE=1e-133 ;
Q/S_length_ratio=0.829"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|R6YL94|R6YL94_9CLOT ;
ALN/Q_length_ratio=0.297 ; DESCRIPTION=Tex-like protein
OS=Clostridium sp. CAG:356 GN=BN624_00014 PE=4 SV=1 ;
EVALUE=1e-116 ; Q/S_length_ratio=1.499"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D5SP95|D5SP95_PLAL2 ;
ALN/Q_length_ratio=0.309 ; DESCRIPTION=RNA binding S1
domain protein OS=Planctomyces limnophilus (strain ATCC
43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_2413 PE=4 SV=1
; EVALUE=1e-115 ; Q/S_length_ratio=1.481"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|R7LSG8|R7LSG8_9CLOT ;
ALN/Q_length_ratio=0.299 ; DESCRIPTION=RNA binding S1
domain protein OS=Clostridium sp. CAG:389 GN=BN638_01304
PE=4 SV=1 ; EVALUE=1e-115 ; Q/S_length_ratio=1.499"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A061NPG5|A0A061NPG5_9BACL ;
ALN/Q_length_ratio=0.300 ; DESCRIPTION=Transcription
accessory protein OS=Geomicrobium sp. JCM 19037
GN=JCM19037_2817 PE=4 SV=1 ; EVALUE=1e-114 ;
Q/S_length_ratio=1.501"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|R9CA24|R9CA24_9BACI ;
ALN/Q_length_ratio=0.302 ; DESCRIPTION=S1 RNA-binding
domain-containing protein OS=Bacillus nealsonii AAU1
GN=A499_02475 PE=4 SV=1 ; EVALUE=1e-114 ;
Q/S_length_ratio=2.652"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|B8D058|B8D058_HALOH ;
ALN/Q_length_ratio=0.289 ; DESCRIPTION=RNA binding S1
domain protein OS=Halothermothrix orenii (strain H 168 /
OCM 544 / DSM 9562) GN=Hore_00510 PE=4 SV=1 ;
EVALUE=1e-114 ; Q/S_length_ratio=1.510"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|R7IR03|R7IR03_9CLOT ;
ALN/Q_length_ratio=0.297 ; DESCRIPTION=Tex-like protein
OS=Clostridium sp. CAG:269 GN=BN577_01244 PE=4 SV=1 ;
EVALUE=1e-114 ; Q/S_length_ratio=1.497"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|R7FJH6|R7FJH6_9CLOT ;
ALN/Q_length_ratio=0.297 ; DESCRIPTION=RNA binding S1
domain protein OS=Clostridium sp. CAG:470 GN=BN670_00952
PE=4 SV=1 ; EVALUE=1e-114 ; Q/S_length_ratio=1.499"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|C6D0I6|C6D0I6_PAESJ ;
ALN/Q_length_ratio=0.288 ; DESCRIPTION=RNA binding S1
domain protein OS=Paenibacillus sp. (strain JDR-2)
GN=Pjdr2_4974 PE=4 SV=1 ; EVALUE=1e-114 ;
Q/S_length_ratio=1.459"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A089J5A7|A0A089J5A7_9BACL ;
ALN/Q_length_ratio=0.294 ; DESCRIPTION=Uncharacterized
protein OS=Paenibacillus sp. FSL H7-0357 GN=H70357_06355
PE=4 SV=1 ; EVALUE=1e-113 ; Q/S_length_ratio=1.469"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A061P189|A0A061P189_9BACL ;
ALN/Q_length_ratio=0.300 ; DESCRIPTION=Transcription
accessory protein OS=Geomicrobium sp. JCM 19039
GN=JCM19039_347 PE=4 SV=1 ; EVALUE=1e-113 ;
Q/S_length_ratio=1.503"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|R7FAC8|R7FAC8_9CLOT ;
ALN/Q_length_ratio=0.299 ; DESCRIPTION=Tex-like
protein-like protein OS=Clostridium sp. CAG:354
GN=BN623_01125 PE=4 SV=1 ; EVALUE=1e-113 ;
Q/S_length_ratio=1.520"
/note="Pfam_scan:hit_1 (89..283); Pfam:PF09371.5:Tex_N;
Pfam_type:Domain;HMM_aln_Length:182; HMM_Length:193;
EVALUE:9e-59; BITSCORE: 198.0"
/note="Pfam_scan:hit_2 (685..749); Pfam:PF12836.2:HHH_3;
Pfam_type:Domain;HMM_aln_Length:64; HMM_Length:65;
EVALUE:8.2e-25; BITSCORE: 86.5"
/note="Pfam_scan:hit_3 (849..921); Pfam:PF00575.18:S1;
Pfam_type:Domain;HMM_aln_Length:68; HMM_Length:74;
EVALUE:2.2e-17; BITSCORE: 62.9"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0003674"
BEGIN
1 MTPSDPTTNV PTDSTVPAPD AAPTETESVA PAESSTAPAV ESATSAEPTA EGAAPAEAAP
61 PPAHREPALP AQPVPDVPPA PQPHDLSRIA QDLQIRKAQV EAVVQLLDDE NTVPFITRYR
121 KERTGGLNED VIRRIQDRVT NLRALTDRKR TILKSIAFQG KLNDALTQAI LAAEAPKRLE
181 DLYLPFKPKK KSLATEAREK GLGPLAEAVF NRDPAVDKLD EVVQGLVDPD KWLLNTDDVM
241 AGVRNILADM VADFAEVRGP LRAFSWDTGV LVSIRGESVP ESKGKEYEPY FDFREPVKDI
301 PPHRVLAINR GEKAGVLKVR IDTDPAMGLE ITTYHLGLAD HPHRGLMLEV AKDALERLLK
361 PSLEREIRRE LTDRAQEHAV MVFAKNLRSL LLQPPLRGRK VLAVDPGIRT GCKLAVLDET
421 GKLLEDAVIY PHGQKKNATD AKRKMEQLVR KYQLSVVAIG NGTGCRDTEQ LVADLISDLA
481 DRRLNPVPDA PQASTLAPET PAAPPAPQEP VLAPVVTAAP AAISLDSGAP VVPTEAVTLS
541 TEAPAALVPA ETTTTHPEAA PAPSETLTTG APDTPSVPVA PAAPAVPPPP PISLEGLPDA
601 PEDLAYVIVI EAGASDYSAS PVAREEFPDL DATTRGTISI GRRLQDPLAE LVKIDPQHIG
661 VGLYQHDVKP KFLKESLEGV IESSVNQVGV DLNTASVPLL RHVSGLNQLV AREIVTYREK
721 QGAFANREQL LQVPGLGEKR FTQAAGFLKL PDGPDPLDST WIHPESYPLA RQVLSDFGLT
781 PADLRDKAKV EELRTKLNGA NLAEIAGKLN VGEPTLDDIF ASLARPGRDP REDLPPPIFK
841 TGVLRLEDIT QGMELKGTVL NVVPFGAFVD IGLKESGLVH ISQMANRYIK SPYDVVSVGD
901 VVTVWVMDVK AGEKKISLSM IPPGQERRPQ ERGPARGGHA PREQRGERPQ QGARPAPQEQ
961 RERPPQPARD DRGGNRGGYP QRGGFQPRQG QGQGGGRFNR GPAPANTNPP ASAQPAEPVQ
1021 PLLPKKPSKP KPLPNLTPEK KAGKAALNTF GELLAFFKPV EPEAPKVEEP KPEVKAEEPK
1081 PEEPKTEGQS
//