LOCUS VTR93819.1 504 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana acetoacetate metabolism regulatory
protein : Response regulator with CheY-like receiver,
AAA-type ATPase, and DNA-binding domains OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_3190 PE=4 SV=1: Response_reg: Sigma54_activat:
HTH_8 protein.
ACCESSION LR593886-3120
PROTEIN_ID VTR93819.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_38950"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DF75|L0DF75_SINAD ;
ALN/Q_length_ratio=0.909 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3190 PE=4 SV=1
; EVALUE=1e-175 ; Q/S_length_ratio=1.079"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F0SR00|F0SR00_PLABD ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Sigma54 specific
transcriptional regulator, Fis family OS=Planctomyces
brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /
NBRC 103401 / IFAM 1448) GN=Plabr_2621 PE=4 SV=1 ;
EVALUE=1e-167 ; Q/S_length_ratio=1.057"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E8R5M9|E8R5M9_ISOPI ;
ALN/Q_length_ratio=0.929 ; DESCRIPTION=Sigma54 specific
transcriptional regulator, Fis family OS=Isosphaera
pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_1192
PE=4 SV=1 ; EVALUE=1e-164 ; Q/S_length_ratio=1.057"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D5SYX9|D5SYX9_PLAL2 ;
ALN/Q_length_ratio=0.905 ; DESCRIPTION=Sigma-54 factor
interaction domain-containing protein OS=Planctomyces
limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 /
290) GN=Plim_2084 PE=4 SV=1 ; EVALUE=1e-164 ;
Q/S_length_ratio=1.057"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A6CGU8|A6CGU8_9PLAN ;
ALN/Q_length_ratio=0.903 ; DESCRIPTION=Acetoacetate
metabolism regulatory protein atoC OS=Planctomyces maris
DSM 8797 GN=PM8797T_01339 PE=4 SV=1 ; EVALUE=1e-162 ;
Q/S_length_ratio=1.084"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A3ZYQ4|A3ZYQ4_9PLAN ;
ALN/Q_length_ratio=0.897 ; DESCRIPTION=Acetoacetate
metabolism regulatory protein atoC OS=Blastopirellula
marina DSM 3645 GN=DSM3645_18041 PE=4 SV=1 ; EVALUE=1e-149
; Q/S_length_ratio=1.096"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D2R3E8|D2R3E8_PIRSD ;
ALN/Q_length_ratio=0.885 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=Psta_0491 PE=4 SV=1 ; EVALUE=1e-147 ;
Q/S_length_ratio=1.084"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5RL97|M5RL97_9PLAN ;
ALN/Q_length_ratio=0.885 ; DESCRIPTION=Sigma-54 dependent
DNA-binding response regulator OS=Rhodopirellula maiorica
SM1 GN=RMSM_02999 PE=4 SV=1 ; EVALUE=1e-141 ;
Q/S_length_ratio=1.122"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|L7CBS2|L7CBS2_RHOBT ;
ALN/Q_length_ratio=0.873 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula baltica SWK14 GN=RBSWK_04765 PE=4 SV=1 ;
EVALUE=1e-137 ; Q/S_length_ratio=1.122"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M2A7J3|M2A7J3_9PLAN ;
ALN/Q_length_ratio=0.873 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula europaea 6C GN=RE6C_01884 PE=4 SV=1 ;
EVALUE=1e-137 ; Q/S_length_ratio=1.122"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F2AWU0|F2AWU0_RHOBT ;
ALN/Q_length_ratio=0.883 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula baltica WH47 GN=RBWH47_06004 PE=4 SV=1 ;
EVALUE=1e-137 ; Q/S_length_ratio=1.093"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q7UVC1|Q7UVC1_RHOBA ;
ALN/Q_length_ratio=0.883 ; DESCRIPTION=Acetoacetate
metabolism regulatory protein atoC OS=Rhodopirellula
baltica (strain SH1) GN=RB2731 PE=4 SV=1 ; EVALUE=1e-136 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M5SKU2|M5SKU2_9PLAN ;
ALN/Q_length_ratio=0.873 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula europaea SH398 GN=RESH_01024 PE=4 SV=1 ;
EVALUE=1e-136 ; Q/S_length_ratio=1.122"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|K5CXK6|K5CXK6_RHOBT ;
ALN/Q_length_ratio=0.873 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula baltica SH28 GN=RBSH_05874 PE=4 SV=1 ;
EVALUE=1e-136 ; Q/S_length_ratio=1.122"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5UFT9|M5UFT9_9PLAN ;
ALN/Q_length_ratio=0.887 ; DESCRIPTION=Sigma-54 dependent
DNA-binding response regulator OS=Rhodopirellula
sallentina SM41 GN=RSSM_03696 PE=4 SV=1 ; EVALUE=1e-133 ;
Q/S_length_ratio=1.079"
/note="Pfam_scan:hit_1 (12..123);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:108; HMM_Length:112;
EVALUE:9.3e-21; BITSCORE: 73.9"
/note="Pfam_scan:hit_2 (151..318);
Pfam:PF00158.21:Sigma54_activat;
Pfam_type:Domain;HMM_aln_Length:166; HMM_Length:168;
EVALUE:9.9e-67; BITSCORE: 223.6"
/note="Pfam_scan:hit_3 (454..495); Pfam:PF02954.14:HTH_8;
Pfam_type:Domain;HMM_aln_Length:41; HMM_Length:42;
EVALUE:2.6e-08; BITSCORE: 33.2"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0007165"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008134"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MATTPAHNRL RILFVDDETH LREFMKSELP RLGHEVTTCA DSKSGIETVK KQTFDAAILD
61 MRMEHDKAGL QVLAALKQVA PDTEAVIMTG YGSTETAVEA LRLGAFDYLT KPCKLTDIEA
121 LLLRIQEKRK LKNKTAALES RVEAAEGPSG LIGASAAMTP VQQFIDRVGP TDGRVLITGE
181 TGTGKEVVAR SLYTKSKRAD MPFVPVNCGA LTQTLAESQL FGHKKGAFTG ADKDHKGFFE
241 VANGGTLFLD ELGELDKNLQ VKLLRVLEAG EIQRLGESQP ITVDVRVISA TNKDLRKMIE
301 EGTFREDLLF RLNMFHVHLP PLRDRREDIP ELARHLLARH AKRPVENVAH LLTPEALRIM
361 LNHDYKGNVR ELTNAMEYAW IVSGGGAITP EALPRDMVYP KPSATIPVAF PVAPSAPAPS
421 GYSAAFPGAP APMPTLPFPA NQGDTGAGTG PTKSLADVEM EYILQVYSKN GMNKQKTSDE
481 LGISLKTLYN KLHKYEEERQ RRAG
//