LOCUS VTR93808.1 1078 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana wd-40 repeat : Uncultured bacterium
genome assembly Metasoil_fosmids_resub OS=uncultured bacterium
PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein.
ACCESSION LR593886-3109
PROTEIN_ID VTR93808.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_39060"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A090KPX2|A0A090KPX2_9BACT ;
ALN/Q_length_ratio=1.015 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=2e-89 ;
Q/S_length_ratio=0.930"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|K9V395|K9V395_9CYAN ;
ALN/Q_length_ratio=0.494 ; DESCRIPTION=(Myosin
heavy-chain) kinase OS=Calothrix sp. PCC 6303
GN=Cal6303_2739 PE=4 SV=1 ; EVALUE=4e-38 ;
Q/S_length_ratio=0.676"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E4TH64|E4TH64_CALNY ;
ALN/Q_length_ratio=0.545 ; DESCRIPTION=WD40 repeat,
subgroup OS=Calditerrivibrio nitroreducens (strain DSM
19672 / NBRC 101217 / Yu37-1) GN=Calni_0847 PE=4 SV=1 ;
EVALUE=4e-37 ; Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A8ZQX9|A8ZQX9_ACAM1 ;
ALN/Q_length_ratio=0.399 ; DESCRIPTION=WD repeat protein
OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_H0065
PE=4 SV=1 ; EVALUE=6e-36 ; Q/S_length_ratio=0.834"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|H1WH51|H1WH51_9CYAN ;
ALN/Q_length_ratio=0.328 ; DESCRIPTION=WD-40 repeat
protein OS=Arthrospira sp. PCC 8005 GN=ARTHRO_50003 PE=4
SV=1 ; EVALUE=8e-36 ; Q/S_length_ratio=1.520"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|W6SPC1|W6SPC1_9CYAN ;
ALN/Q_length_ratio=0.328 ; DESCRIPTION=WD-40 repeat
protein OS=Arthrospira sp. GN=ARTHRO_40436 PE=4 SV=1 ;
EVALUE=8e-36 ; Q/S_length_ratio=1.520"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|B5VVI6|B5VVI6_ARTMA ;
ALN/Q_length_ratio=0.412 ; DESCRIPTION=WD-40 repeat
protein OS=Arthrospira maxima CS-328 GN=AmaxDRAFT_0527
PE=4 SV=1 ; EVALUE=2e-35 ; Q/S_length_ratio=1.300"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|K9UX17|K9UX17_9CYAN ;
ALN/Q_length_ratio=0.361 ; DESCRIPTION=(Myosin
heavy-chain) kinase OS=Calothrix sp. PCC 6303
GN=Cal6303_1366 PE=4 SV=1 ; EVALUE=2e-32 ;
Q/S_length_ratio=1.711"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|B2IXC4|B2IXC4_NOSP7 ;
ALN/Q_length_ratio=0.524 ; DESCRIPTION=WD-40 repeat
protein OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=Npun_F1222 PE=4 SV=1 ; EVALUE=3e-32 ;
Q/S_length_ratio=0.889"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|C7RS72|C7RS72_ACCPU ;
ALN/Q_length_ratio=0.506 ; DESCRIPTION=WD-40 repeat
protein OS=Accumulibacter phosphatis (strain UW-1)
GN=CAP2UW1_2609 PE=4 SV=1 ; EVALUE=2e-30 ;
Q/S_length_ratio=0.621"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F5YNI8|F5YNI8_TREPZ ;
ALN/Q_length_ratio=0.444 ; DESCRIPTION=NB-ARC domain
protein OS=Treponema primitia (strain ATCC BAA-887 / DSM
12427 / ZAS-2) GN=TREPR_2995 PE=4 SV=1 ; EVALUE=4e-30 ;
Q/S_length_ratio=1.002"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|X0KUP7|X0KUP7_FUSOX ;
ALN/Q_length_ratio=0.574 ; DESCRIPTION=Uncharacterized
protein OS=Fusarium oxysporum f. sp. vasinfectum 25433
GN=FOTG_18972 PE=4 SV=1 ; EVALUE=5e-30 ;
Q/S_length_ratio=1.209"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|B7KD29|B7KD29_CYAP7 ;
ALN/Q_length_ratio=0.436 ; DESCRIPTION=WD-40 repeat
protein OS=Cyanothece sp. (strain PCC 7424)
GN=PCC7424_4792 PE=4 SV=1 ; EVALUE=6e-30 ;
Q/S_length_ratio=0.791"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A084Y8X0|A0A084Y8X0_9CYAN ;
ALN/Q_length_ratio=0.526 ; DESCRIPTION=Uncharacterized
protein OS=Calothrix sp. 336/3 GN=IJ00_01065 PE=4 SV=1 ;
EVALUE=9e-30 ; Q/S_length_ratio=0.879"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|L0DM90|L0DM90_SINAD ;
ALN/Q_length_ratio=0.252 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_6419 PE=4 SV=1 ; EVALUE=2e-29 ;
Q/S_length_ratio=1.756"
/note="Pfam_scan:hit_1 (38..103);
Pfam:PF04542.9:Sigma70_r2;
Pfam_type:Domain;HMM_aln_Length:61; HMM_Length:71;
EVALUE:6.2e-09; BITSCORE: 35.3"
/note="Pfam_scan:hit_2 (128..181);
Pfam:PF08281.7:Sigma70_r4_2;
Pfam_type:Domain;HMM_aln_Length:52; HMM_Length:54;
EVALUE:2.1e-08; BITSCORE: 33.4"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0000988"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MSAPVVIRSL ARALRPECNE SNLLTRAAGG DGGAFTELVR RHGPMVLGVC HRVLGPTTDA
61 DDAFQTTFLA LVENARALHT PTALPGWLHR TAFRAAMKLK ARRISPTAPP EPAITAEPLA
121 DLSWKEVRAA LDEELNALPD DLRAPLVLCY LDGQTRDAAA AVLGVSLSTL KRRLADGLDR
181 LNRRLTRRGV SGLGLVAAAL SGSGLTAAVP LTLAQRTGAA FGARTADVVG TMFPLWGWKV
241 TASIVLLVGG LAAGMGLPAH DDPVDPPSSE KKQPAEPEAK ARTDADGAPL PDGAVLRLGS
301 TLFRHAGLSD FVLLPDGKSV LSAGSDQQLR TWDLSTGREL RKVPVTTNVK WLDCLSPDGR
361 LAAGFAGKNL VVFDTATGKE KASFLAPGKD FHSTFFSPDG NTLAVLTWEP RLTLVEWSTQ
421 KQRELPLPAR RIGQDSTFHG YFSTTGKWIV TGGGWGEPIC VFDAATGTEK HRLDCAGSRS
481 TLTPDDRTLI VSSWKPNGQK GSELVTFDLT TGREQARFDM GSRQHFYSLD VSPDGKTLAC
541 GFTDDSCLVD LGSGRVLREL TGRPIAVTFT RNGKHVIAST GQKLRVWTAA TGTELFERPG
601 NLGHLPVLAA SPDGKTLTSA DWLDKGISVW DLTNGRLVRT QPFRGKEGRY VRNLSFSPDG
661 YTAWAADHEG FVQWWEPTTG KEQRSVQLNI PVTNPPQFTY LYQVRVSSDG KTAAALARQL
721 AQSEKTSCVV WDIASGRVKG ERVLPPEQRV WAWTADESTV ALSTPDSLIV ADGADPSRTR
781 FTISGVEANA PIAFSSDGRL LATRRTTKEE PNAGGVIIVE VTTGAVVAVV KTGKIDRVAL
841 ADGGRTLVTT GAGALKVFDT TSGAERGRWA VPVQSTALLL AGDTRAITAL ADGTGLVWDL
901 TAFPVRAKVS ADTPTKLWDT LAGKDSPATH KAAWELVDRP AEALDLIRDK LKPTRPADEV
961 TVRKLISKLD DTDFVERESA TKALQALSTA AAPALRSALK ADPSAERADR IKRLLAALNA
1021 PVVPAGDNLR ELRAVAILER IGTAEARKVL DTLTGGIPDA RLTVEAAAAV TRLKAQSK
//