LOCUS VTR93798.1 780 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana pas domain s-box : PAS domain S-box
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_7190 PE=4 SV=1: PAS_3:
HisKA: HATPase_c: Response_reg: Hpt protein.
ACCESSION LR593886-3099
PROTEIN_ID VTR93798.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_39160"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DQL0|L0DQL0_SINAD ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=PAS domain S-box
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_7190 PE=4 SV=1 ;
EVALUE=1e-144 ; Q/S_length_ratio=0.855"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D8PBG3|D8PBG3_9BACT ;
ALN/Q_length_ratio=0.710 ; DESCRIPTION=Putative Hybrid
histidine kinase OS=Candidatus Nitrospira defluvii
GN=NIDE0805 PE=4 SV=1 ; EVALUE=1e-129 ;
Q/S_length_ratio=0.645"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F3YUD8|F3YUD8_DESAF ;
ALN/Q_length_ratio=0.671 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Desulfovibrio africanus str.
Walvis Bay GN=Desaf_0466 PE=4 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=0.921"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5PQX0|M5PQX0_DESAF ;
ALN/Q_length_ratio=0.671 ; DESCRIPTION=PAS domain S-box
OS=Desulfovibrio africanus PCS GN=PCS_02950 PE=4 SV=1 ;
EVALUE=1e-124 ; Q/S_length_ratio=0.921"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|W4LA90|W4LA90_9DELT ;
ALN/Q_length_ratio=0.510 ; DESCRIPTION=Uncharacterized
protein OS=Candidatus Entotheonella sp. TSY1
GN=ETSY1_35730 PE=4 SV=1 ; EVALUE=1e-124 ;
Q/S_length_ratio=1.180"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L0DCR0|L0DCR0_SINAD ;
ALN/Q_length_ratio=0.560 ; DESCRIPTION=PAS domain S-box
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_2731 PE=4 SV=1 ;
EVALUE=1e-124 ; Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|G8QGA3|G8QGA3_AZOSU ;
ALN/Q_length_ratio=0.677 ; DESCRIPTION=PAS domain S-box
OS=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS)
GN=Dsui_2885 PE=4 SV=1 ; EVALUE=1e-123 ;
Q/S_length_ratio=0.745"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q8TPA1|Q8TPA1_METAC ;
ALN/Q_length_ratio=0.772 ; DESCRIPTION=Sensory
transduction histidine kinase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=MA_2013 PE=4 SV=1 ; EVALUE=1e-121 ;
Q/S_length_ratio=0.780"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|U5NB06|U5NB06_9BURK ;
ALN/Q_length_ratio=0.826 ; DESCRIPTION=Signal transduction
histidine kinase OS=Candidatus Symbiobacter mobilis CR
GN=Cenrod_2440 PE=4 SV=1 ; EVALUE=1e-121 ;
Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D9SCI6|D9SCI6_GALCS ;
ALN/Q_length_ratio=0.663 ; DESCRIPTION=Multi-sensor hybrid
histidine kinase OS=Gallionella capsiferriformans (strain
ES-2) GN=Galf_2568 PE=4 SV=1 ; EVALUE=1e-117 ;
Q/S_length_ratio=0.633"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|B5EAU9|B5EAU9_GEOBB ;
ALN/Q_length_ratio=0.586 ; DESCRIPTION=Sensor histidine
kinase response regulator, PAS domain-containing
OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 /
DSM 16622) GN=Gbem_0379 PE=4 SV=1 ; EVALUE=1e-114 ;
Q/S_length_ratio=1.206"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|D6Z442|D6Z442_DESAT ;
ALN/Q_length_ratio=0.842 ; DESCRIPTION=Multi-sensor hybrid
histidine kinase OS=Desulfurivibrio alkaliphilus (strain
DSM 19089 / UNIQEM U267 / AHT2) GN=DaAHT2_1624 PE=4 SV=1 ;
EVALUE=1e-114 ; Q/S_length_ratio=0.967"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D5MGF7|D5MGF7_9BACT ;
ALN/Q_length_ratio=0.508 ; DESCRIPTION=Sensor protein
OS=Candidatus Methylomirabilis oxyfera GN=DAMO_1780 PE=4
SV=1 ; EVALUE=1e-113 ; Q/S_length_ratio=1.142"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|H8Z0M8|H8Z0M8_9GAMM ;
ALN/Q_length_ratio=0.663 ; DESCRIPTION=PAS domain S-box
OS=Thiorhodovibrio sp. 970 GN=Thi970DRAFT_02626 PE=4 SV=1
; EVALUE=1e-112 ; Q/S_length_ratio=0.962"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|L9PH60|L9PH60_9BURK ;
ALN/Q_length_ratio=0.671 ; DESCRIPTION=Multi-sensor hybrid
histidine kinase OS=Janthinobacterium sp. HH01
GN=Jab_2c30820 PE=4 SV=1 ; EVALUE=1e-111 ;
Q/S_length_ratio=1.037"
/note="Pfam_scan:hit_1 (164..246); Pfam:PF08447.6:PAS_3;
Pfam_type:Domain;HMM_aln_Length:78; HMM_Length:91;
EVALUE:2.5e-16; BITSCORE: 59.5"
/note="Pfam_scan:hit_2 (272..337); Pfam:PF00512.20:HisKA;
Pfam_type:Domain;HMM_aln_Length:67; HMM_Length:68;
EVALUE:9.5e-22; BITSCORE: 76.7"
/note="Pfam_scan:hit_3 (384..500);
Pfam:PF02518.21:HATPase_c;
Pfam_type:Domain;HMM_aln_Length:108; HMM_Length:111;
EVALUE:9.4e-27; BITSCORE: 92.9"
/note="Pfam_scan:hit_4 (536..650);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:110; HMM_Length:112;
EVALUE:5.2e-27; BITSCORE: 94.0"
/note="Pfam_scan:hit_5 (684..772); Pfam:PF01627.18:Hpt;
Pfam_type:Family;HMM_aln_Length:82; HMM_Length:90;
EVALUE:1.4e-05; BITSCORE: 24.9"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MDELRPDRRI GYSVALAATT ITFALRLALW PIIGDVVPHM AFLPAVMLAA YVGGFRPGLM
61 ATALSAVAAN LVFTEPHFRL GIKSLNAAVA LPLFLFVGVM MSGVCEALHR TRRRLLAEER
121 ARAAEAIRET EERLELGVRG SNVGIWDLAL PDGTFENGRL TAVNLWEQFG YTSEPPLDFE
181 GRIAMWHPDD RERVLRAVRA CLKGETKDFE AEYRLRHRDG SYQWRLNRGV VVRDATGRPA
241 RFIGSSVDIT NRVRAEEELR RAKEIAESAN RAKDEFLANV SHEIRTPMNA ILGMTELTLD
301 TSLNADQRQW LETVKSAAEN LLAIINDLLD FSKIEAGKME LDPVDFSLRT ALDDVIRALT
361 PRAQQKGLAL TSHVRADVPD ALTGDAGRFR QVLLNLIGNA VKFTERGSVT VEVAVQDTQA
421 PNRCVLRVSV QDTGIGIARD KRETIFRAFE QADNSMTRKY GGTGLGVSIA SRLAGLMGGT
481 IAVDSELGRG STFHFAARFQ LPAKAASPQN AAQAQGKPQT MEQHPPSASA PAPLRVLLAE
541 DNEFNAQLME QLLIRRGHRV RLAPDGEQAL ALAAEGNADV LLLDLHMPER DGFQVIRALR
601 EREAGTGRHL PVIALTASAR PEDRARCLAA GMDDFLTKPV RSPELFAAIE RVIRSRRVPE
661 VVESMLTPSA ILAACEEDAA LLEKLCKWFR DKVPAHLSAL SAACRAENLF GIQEAAHKLA
721 GTLAVFSTPA GELASRAEDR AAVGELREAV ALAAQLESAV NSLLRQTDGL RMEHLTVRAG
//