LOCUS VTR93719.1 406 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana fis family transcriptional regulator
: Putative two component, sigma54 specific, transcriptional
regulator OS=Niastella koreensis (strain DSM 17620 / KACC
11465 / GR20-10) GN=Niako_1599 PE=4 SV=1: Response_reg:
GAF_2 protein.
ACCESSION LR593886-3020
PROTEIN_ID VTR93719.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_39950"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|G8T6W5|G8T6W5_NIAKG ;
ALN/Q_length_ratio=0.458 ; DESCRIPTION=Putative two
component, sigma54 specific, transcriptional regulator
OS=Niastella koreensis (strain DSM 17620 / KACC 11465 /
GR20-10) GN=Niako_1599 PE=4 SV=1 ; EVALUE=7e-13 ;
Q/S_length_ratio=1.049"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|B3EBE8|B3EBE8_GEOLS ;
ALN/Q_length_ratio=0.254 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 /
SZ) GN=Glov_1826 PE=4 SV=1 ; EVALUE=4e-12 ;
Q/S_length_ratio=0.892"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A098WMY7|A0A098WMY7_9CYAN ;
ALN/Q_length_ratio=0.456 ; DESCRIPTION=Fis family
transcriptional regulator OS=Tolypothrix bouteillei
VB521301 GN=DA73_53320 PE=4 SV=1 ; EVALUE=6e-12 ;
Q/S_length_ratio=1.046"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A098WTI7|A0A098WTI7_9CYAN ;
ALN/Q_length_ratio=0.433 ; DESCRIPTION=Fis family
transcriptional regulator OS=Tolypothrix bouteillei
VB521301 GN=DA73_000000134355 PE=4 SV=1 ; EVALUE=2e-11 ;
Q/S_length_ratio=1.049"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|C7PKT2|C7PKT2_CHIPD ;
ALN/Q_length_ratio=0.433 ; DESCRIPTION=Putative two
component, sigma54 specific, transcriptional regulator,
Fis family OS=Chitinophaga pinensis (strain ATCC 43595 /
DSM 2588 / NCIB 11800 / UQM 2034) GN=Cpin_6438 PE=4 SV=1 ;
EVALUE=3e-11 ; Q/S_length_ratio=1.030"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A087FC34|A0A087FC34_9PSED ;
ALN/Q_length_ratio=0.333 ; DESCRIPTION=C4-dicarboxylate
ABC transporter OS=Pseudomonas sp. 1-7 GN=JF55_10170 PE=4
SV=1 ; EVALUE=5e-11 ; Q/S_length_ratio=0.904"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|U1UBK4|U1UBK4_PSEME ;
ALN/Q_length_ratio=0.333 ; DESCRIPTION=Fis family
transcriptional regulator OS=Pseudomonas mendocina EGD-AQ5
GN=O203_00600 PE=4 SV=1 ; EVALUE=5e-11 ;
Q/S_length_ratio=0.910"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|G8R2I3|G8R2I3_OWEHD ;
ALN/Q_length_ratio=0.328 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Owenweeksia hongkongensis (strain DSM 17368 /
JCM 12287 / NRRL B-23963) GN=Oweho_3040 PE=4 SV=1 ;
EVALUE=6e-11 ; Q/S_length_ratio=1.049"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q1K0W7|Q1K0W7_DESAC ;
ALN/Q_length_ratio=0.249 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Desulfuromonas acetoxidans DSM 684 GN=Dace_1705 PE=4
SV=1 ; EVALUE=7e-11 ; Q/S_length_ratio=0.879"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A0A6YT02|A0A0A6YT02_9FLAO ;
ALN/Q_length_ratio=0.431 ; DESCRIPTION=Putative response
regulator/sigma54 interaction protein OS=Capnocytophaga
sp. oral taxon 329 str. F0087 GN=HMPREF9074_08377 PE=4
SV=1 ; EVALUE=7e-11 ; Q/S_length_ratio=1.049"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|W6R1G7|W6R1G7_PSEPS ;
ALN/Q_length_ratio=0.333 ; DESCRIPTION=Transcriptional
regulatory protein zraR OS=Pseudomonas pseudoalcaligenes
CECT 5344 GN=dctD3 PE=4 SV=1 ; EVALUE=9e-11 ;
Q/S_length_ratio=0.910"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A061CYL1|A0A061CYL1_PSEPS ;
ALN/Q_length_ratio=0.333 ; DESCRIPTION=Transcriptional
regulatory protein zraR OS=Pseudomonas pseudoalcaligenes
GN=dctD3 PE=4 SV=1 ; EVALUE=9e-11 ;
Q/S_length_ratio=0.910"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|F4DTH9|F4DTH9_PSEMN ;
ALN/Q_length_ratio=0.333 ; DESCRIPTION=Two component,
sigma54 specific, fis family transcriptional regulator
OS=Pseudomonas mendocina (strain NK-01) GN=MDS_4889 PE=4
SV=1 ; EVALUE=2e-10 ; Q/S_length_ratio=0.910"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A081XEV0|A0A081XEV0_PSEME ;
ALN/Q_length_ratio=0.333 ; DESCRIPTION=C4-dicarboxylate
ABC transporter OS=Pseudomonas mendocina GN=HN51_20005
PE=4 SV=1 ; EVALUE=2e-10 ; Q/S_length_ratio=0.910"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A084UHU2|A0A084UHU2_PSEME ;
ALN/Q_length_ratio=0.333 ; DESCRIPTION=C4-dicarboxylate
ABC transporter OS=Pseudomonas mendocina S5.2
GN=DW68_03815 PE=4 SV=1 ; EVALUE=2e-10 ;
Q/S_length_ratio=0.910"
/note="Pfam_scan:hit_1 (5..120);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:104; HMM_Length:112;
EVALUE:2.4e-17; BITSCORE: 62.9"
/note="Pfam_scan:hit_2 (164..302); Pfam:PF13185.1:GAF_2;
Pfam_type:Domain;HMM_aln_Length:128; HMM_Length:148;
EVALUE:2.2e-06; BITSCORE: 28.2"
/note="GO_domain:GO:0007165"
BEGIN
1 MTDTVLIVDD EESVRRTFQE WLTTSMPDAR VFAVADSESA LRIANEHAVD LAVLDWNLGS
61 GSDGLRLLED LVEFQPDVVA ILVTGFAHQA TPLDALRMGV RDYIDKNQDL NRETFVAAIR
121 RQLDRIRPVK QQRELNHRLA TFREAVEKVL PIVQTSAAFN DPVPLPAAVK SLLRFVIRGT
181 RAVDGALIVR HTAADGTEST VAYGADGVPL PAPPVSFGKS LAASVISFQK PVALDASDSD
241 ALGSLELFPF EANRSCILAA PLRVATDTVV VVELFDKAAP GFSDDDRRLV MSAAELGTDL
301 LRQAVAERQT HKLLFDAVDA ALKATSDFST APAPAPDTSA PLSSVMAKLK EGLGADSNAT
361 APPDTTLRLV EAVRAIAVKH GPSAVEHCVR AVNDLRALLD EITGSA
//