LOCUS VTR93699.1 481 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana signal recognition particle protein
: Signal recognition particle protein OS=Isosphaera pallida
(strain ATCC 43644 / DSM 9630 / IS1B) GN=ffh PE=3 SV=1:
SRP54_N: SRP54: SRP_SPB protein.
ACCESSION LR593886-3000
PROTEIN_ID VTR93699.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_40150"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E8R155|E8R155_ISOPI ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=Signal recognition
particle protein OS=Isosphaera pallida (strain ATCC 43644
/ DSM 9630 / IS1B) GN=ffh PE=3 SV=1 ; EVALUE=1e-167 ;
Q/S_length_ratio=0.972"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DG41|L0DG41_SINAD ;
ALN/Q_length_ratio=0.965 ; DESCRIPTION=Signal recognition
particle protein OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=ffh PE=3
SV=1 ; EVALUE=1e-164 ; Q/S_length_ratio=0.976"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D5SNA6|D5SNA6_PLAL2 ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=Signal recognition
particle protein OS=Planctomyces limnophilus (strain ATCC
43296 / DSM 3776 / IFAM 1008 / 290) GN=ffh PE=3 SV=1 ;
EVALUE=1e-154 ; Q/S_length_ratio=0.980"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|F0SPB4|F0SPB4_PLABD ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=Signal recognition
particle protein OS=Planctomyces brasiliensis (strain ATCC
49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
GN=ffh PE=3 SV=1 ; EVALUE=1e-153 ; Q/S_length_ratio=0.972"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5SZY2|M5SZY2_9PLAN ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Signal recognition
particle protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_05001
PE=4 SV=1 ; EVALUE=1e-151 ; Q/S_length_ratio=0.980"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A6BZ37|A6BZ37_9PLAN ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=Signal recognition
particle protein OS=Planctomyces maris DSM 8797 GN=ffh
PE=3 SV=1 ; EVALUE=1e-149 ; Q/S_length_ratio=0.978"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A4A167|A4A167_9PLAN ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=Signal recognition
particle protein OS=Blastopirellula marina DSM 3645 GN=ffh
PE=3 SV=1 ; EVALUE=1e-148 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|I3IH30|I3IH30_9PLAN ;
ALN/Q_length_ratio=0.884 ; DESCRIPTION=Signal recognition
particle protein OS=planctomycete KSU-1 GN=ffh PE=3 SV=1 ;
EVALUE=1e-147 ; Q/S_length_ratio=1.069"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D2R2U0|D2R2U0_PIRSD ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=Signal recognition
particle protein OS=Pirellula staleyi (strain ATCC 27377 /
DSM 6068 / ICPB 4128) GN=ffh PE=3 SV=1 ; EVALUE=1e-144 ;
Q/S_length_ratio=0.980"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F5L7S4|F5L7S4_9BACI ;
ALN/Q_length_ratio=0.896 ; DESCRIPTION=Signal recognition
particle protein OS=Caldalkalibacillus thermarum TA2.A1
GN=ffh PE=3 SV=1 ; EVALUE=1e-143 ; Q/S_length_ratio=1.071"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K6CUD3|K6CUD3_BACAZ ;
ALN/Q_length_ratio=0.900 ; DESCRIPTION=Signal recognition
particle protein OS=Bacillus azotoformans LMG 9581 GN=ffh
PE=3 SV=1 ; EVALUE=1e-141 ; Q/S_length_ratio=1.076"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|U6SNH2|U6SNH2_9BACI ;
ALN/Q_length_ratio=0.898 ; DESCRIPTION=Signal recognition
particle protein OS=Bacillus marmarensis DSM 21297 GN=ffh
PE=3 SV=1 ; EVALUE=1e-141 ; Q/S_length_ratio=1.064"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M5UIG8|M5UIG8_9PLAN ;
ALN/Q_length_ratio=0.946 ; DESCRIPTION=Signal recognition
particle protein OS=Rhodopirellula sallentina SM41
GN=RSSM_00900 PE=4 SV=1 ; EVALUE=1e-141 ;
Q/S_length_ratio=1.034"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|I7LG15|I7LG15_9CLOT ;
ALN/Q_length_ratio=0.896 ; DESCRIPTION=Signal recognition
particle protein OS=Caloramator australicus RC3 GN=ffh
PE=3 SV=1 ; EVALUE=1e-141 ; Q/S_length_ratio=1.048"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q3AC68|Q3AC68_CARHZ ;
ALN/Q_length_ratio=0.892 ; DESCRIPTION=Signal recognition
particle protein OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=ffh PE=3 SV=1 ;
EVALUE=1e-141 ; Q/S_length_ratio=1.078"
/note="Pfam_scan:hit_1 (5..82); Pfam:PF02881.14:SRP54_N;
Pfam_type:Domain;HMM_aln_Length:73; HMM_Length:75;
EVALUE:7.6e-15; BITSCORE: 54.7"
/note="Pfam_scan:hit_2 (100..293); Pfam:PF00448.17:SRP54;
Pfam_type:Family;HMM_aln_Length:194; HMM_Length:196;
EVALUE:5.8e-74; BITSCORE: 247.7"
/note="Pfam_scan:hit_3 (327..423);
Pfam:PF02978.14:SRP_SPB;
Pfam_type:Domain;HMM_aln_Length:103; HMM_Length:104;
EVALUE:6.9e-28; BITSCORE: 96.9"
/note="GO_domain:GO:0006605"
/note="GO_domain:GO:0061024"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0005737"
/note="GO_domain:GO:0003924"
/note="GO_domain:GO:0043167"
/note="Enzyme_Code:EC:3.6.1"
/note="Enzyme_Code:EC:3.6.1.15"
BEGIN
1 MFEGITKSLG EALKKLKGRG RLTAENVKDG LREVRRAFLE ADVNFNVASD FIARVEAKSL
61 GQDVLAKVDP SEQIVKNVYE ELVALMGPVD HKIPQRSDRP VVLMLCGLQG SGKTTTAAKL
121 ALTLKGQNRK PMLAAADLQR PGAVEQLKTL GEQIGVPVYS EATNPVDVCR NAVAQAKRTL
181 CDIVILDTAG RLQIDADLMA ELQRIDKLVK PDECYLVVDA MIGQEAANVA KAFNDALELN
241 ACILTKLDGD ARGGAALSIK GVTGVPIKFV GMGEKVDKLE DFVPERMAGR ILGQGDMMGI
301 VEKIASIQQE MSQEELQRQQ EAIQKGNFTL DDFRKQFEQI AKMGMKDMIS RMPGMSEMIP
361 AGEDPEVALK RVQGMIDSMT KKEKADPDII DTPRRRRIAK GAGVEPHEVN QFLKQFAQVR
421 VLMKQMASMS LWQRLKMVTG MGKMGAFMPG GMDNMKLKGD TGHRKSAKER ADERKKKKKR
481 R
//