LOCUS VTR93673.1 863 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana pas pac sensor hybrid histidine kinase
: Sensor histidine kinase response regulator, PAS and
PAS domain-containing OS=Geobacter bemidjiensis (strain
Bem / ATCC BAA-1014 / DSM 16622) GN=Gbem_3878 PE=4 SV=
1: PAS_9: PAS_8: PAS_4: HisKA: HATPase_c: Response_reg
protein.
ACCESSION LR593886-2974
PROTEIN_ID VTR93673.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_40410"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|B5EFB5|B5EFB5_GEOBB ;
ALN/Q_length_ratio=0.722 ; DESCRIPTION=Sensor histidine
kinase response regulator, PAS and PAS domain-containing
OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 /
DSM 16622) GN=Gbem_3878 PE=4 SV=1 ; EVALUE=1e-108 ;
Q/S_length_ratio=1.282"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D0LM37|D0LM37_HALO1 ;
ALN/Q_length_ratio=0.583 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Haliangium ochraceum (strain
DSM 14365 / JCM 11303 / SMP-2) GN=Hoch_2685 PE=4 SV=1 ;
EVALUE=1e-107 ; Q/S_length_ratio=1.308"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E8WIP1|E8WIP1_GEOS8 ;
ALN/Q_length_ratio=0.722 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Geobacter sp. (strain M18)
GN=GM18_4310 PE=4 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=1.294"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|C6E8J1|C6E8J1_GEOSM ;
ALN/Q_length_ratio=0.722 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Geobacter sp. (strain M21)
GN=GM21_3966 PE=4 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=1.275"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|B4CYF0|B4CYF0_9BACT ;
ALN/Q_length_ratio=0.736 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Chthoniobacter flavus Ellin428
GN=CfE428DRAFT_1688 PE=4 SV=1 ; EVALUE=1e-106 ;
Q/S_length_ratio=0.818"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|B9XC97|B9XC97_PEDPL ;
ALN/Q_length_ratio=0.737 ; DESCRIPTION=Multi-sensor hybrid
histidine kinase OS=Pedosphaera parvula (strain Ellin514)
GN=Cflav_PD5200 PE=4 SV=1 ; EVALUE=1e-105 ;
Q/S_length_ratio=0.814"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A1AN42|A1AN42_PELPD ;
ALN/Q_length_ratio=0.859 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Pelobacter propionicus (strain
DSM 2379) GN=Ppro_1138 PE=4 SV=1 ; EVALUE=1e-105 ;
Q/S_length_ratio=0.878"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|W0RW81|W0RW81_9BACT ;
ALN/Q_length_ratio=0.861 ; DESCRIPTION=PAS sensor protein
OS=Gemmatimonadetes bacterium KBS708 GN=J421_6298 PE=4
SV=1 ; EVALUE=1e-104 ; Q/S_length_ratio=0.855"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|E8RJA4|E8RJA4_DESPD ;
ALN/Q_length_ratio=0.818 ; DESCRIPTION=Signal transduction
histidine kinase, nitrogen specific, NtrB OS=Desulfobulbus
propionicus (strain ATCC 33891 / DSM 2032 / 1pr3)
GN=Despr_1366 PE=4 SV=1 ; EVALUE=1e-102 ;
Q/S_length_ratio=1.040"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q1INJ5|Q1INJ5_KORVE ;
ALN/Q_length_ratio=0.596 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Koribacter versatilis (strain
Ellin345) GN=Acid345_2554 PE=4 SV=1 ; EVALUE=1e-100 ;
Q/S_length_ratio=1.566"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q212L2|Q212L2_RHOPB ;
ALN/Q_length_ratio=0.844 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Rhodopseudomonas palustris
(strain BisB18) GN=RPC_3132 PE=4 SV=1 ; EVALUE=3e-99 ;
Q/S_length_ratio=1.162"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|E1Y9P1|E1Y9P1_9DELT ;
ALN/Q_length_ratio=0.738 ; DESCRIPTION=Putative
uncharacterized protein OS=uncultured Desulfobacterium sp.
GN=N47_I07050 PE=4 SV=1 ; EVALUE=3e-99 ;
Q/S_length_ratio=0.689"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D7AIK0|D7AIK0_GEOSK ;
ALN/Q_length_ratio=0.760 ; DESCRIPTION=Sensor histidine
kinase response regulator, PAS, PAS and PAS
domain-containing OS=Geobacter sulfurreducens (strain DL-1
/ KN400) GN=KN400_1442 PE=4 SV=2 ; EVALUE=7e-99 ;
Q/S_length_ratio=1.023"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q74DA3|Q74DA3_GEOSL ;
ALN/Q_length_ratio=0.760 ; DESCRIPTION=Sensor histidine
kinase response regulator, PAS, PAS and PAS
domain-containing OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=GSU1414 PE=1 SV=1 ;
EVALUE=7e-99 ; Q/S_length_ratio=1.023"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B4D3J9|B4D3J9_9BACT ;
ALN/Q_length_ratio=0.742 ; DESCRIPTION=Multi-sensor hybrid
histidine kinase OS=Chthoniobacter flavus Ellin428
GN=CfE428DRAFT_3487 PE=4 SV=1 ; EVALUE=1e-98 ;
Q/S_length_ratio=0.914"
/note="Pfam_scan:hit_1 (117..221); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:101; HMM_Length:104;
EVALUE:4.4e-14; BITSCORE: 52.7"
/note="Pfam_scan:hit_2 (234..297); Pfam:PF13188.1:PAS_8;
Pfam_type:Domain;HMM_aln_Length:40; HMM_Length:64;
EVALUE:9.5e-07; BITSCORE: 28.4"
/note="Pfam_scan:hit_3 (355..468); Pfam:PF08448.5:PAS_4;
Pfam_type:Domain;HMM_aln_Length:108; HMM_Length:110;
EVALUE:4.3e-17; BITSCORE: 62.1"
/note="Pfam_scan:hit_4 (481..545); Pfam:PF00512.20:HisKA;
Pfam_type:Domain;HMM_aln_Length:64; HMM_Length:68;
EVALUE:1.1e-10; BITSCORE: 41.3"
/note="Pfam_scan:hit_5 (587..699);
Pfam:PF02518.21:HATPase_c;
Pfam_type:Domain;HMM_aln_Length:107; HMM_Length:111;
EVALUE:8.5e-21; BITSCORE: 73.7"
/note="Pfam_scan:hit_6 (726..835);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:110; HMM_Length:112;
EVALUE:1.1e-19; BITSCORE: 70.5"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MPSALTSLTT IVPVTDGLLA LAALIGTWFV LTQHRRPVPA RTLAALFGAV GLGFAGHALS
61 PLIGARAVIG VVGFGAVLAW GAVVRLWFHV PPLLAAPPVV ETGTDPQLLD VALGACGDGV
121 VIATTDEHDG VQVVYSNAAF ERLTGYSCDE AVGLSPSVLA DEADGLAAIR EAVRSTAPVR
181 VELPGRRKDG TRVWAEWQIV PVSDAEGRHT HSVAVIRETT ERRRAEQALR ESEGRFRGLF
241 EQAADAILVL DRHGRVVDAN HQACHTLGHA REELTALTLA DLGMKPAADL GPGETSTSES
301 IYRRRDGAAL AVEVRYTVIE TGGRRLHLAL IRDVTRRRRA EQALREREDM LRTVITHIPC
361 GVFWKNRDLV YLGCNDQVAR DHGAIAAEDL VGRNDFDLTN VHSEATFYRD CDQQVMESGQ
421 AILNLEEFQT RPDGSRATLL TSKVPLRDTR GQVVGVLGVY QDITDRKRLE EQLRQSQKME
481 AVGRLAGGVA HDFNNLLTII RGNAELLRSP AEDAAASALF DDLLLAADRA TALVRQLLMF
541 SRRQPVRVEI LDLNEVVTTV SGLLRRLLGE HITVETALAP VPVTVRADRS HLEQVILNLA
601 VNARDAMPGG GTLTVGTVAL ERKLGEPRFA RLTVTDTGTG MTDEVKGQIF EPFFTTKGPD
661 KGTGLGLATV FGIVEQAGGR IGVESEPGAG TTFHVELPWW EGNASVLGRT PAPRSLSGRT
721 GRGVSVLLVE DQDAVRQFAR LALRTQGHEV HEAENGEAAL ELANKGTHFD AIVTDVTMPG
781 IDGRELAARM RVLRPNIAVV IMSGYAAESE RVEPVANSVF LAKPFPPGDL FEALNKALRL
841 VHCEPKSAVS SSHGPPPPAV IRA
//