LOCUS VTR93644.1 495 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana response regulator with -like aaa-type
and dna-binding domains : Response regulator with CheY-
like receiver, AAA-type ATPase, and DNA-binding domains
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_1278 PE=4 SV=1: Response_reg:
Sigma54_activat: HTH_8 protein.
ACCESSION LR593886-2945
PROTEIN_ID VTR93644.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_40700"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0D8V2|L0D8V2_SINAD ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1278 PE=4 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=1.031"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DPR2|L0DPR2_SINAD ;
ALN/Q_length_ratio=0.968 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7189 PE=4 SV=1
; EVALUE=1e-176 ; Q/S_length_ratio=1.031"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0D954|L0D954_SINAD ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0782 PE=4 SV=1
; EVALUE=1e-166 ; Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A6CBD4|A6CBD4_9PLAN ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=Nitrogen
assimilation regulatory protein OS=Planctomyces maris DSM
8797 GN=PM8797T_15566 PE=4 SV=1 ; EVALUE=1e-161 ;
Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5T5I6|M5T5I6_9PLAN ;
ALN/Q_length_ratio=0.935 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula sp. SWK7 GN=RRSWK_06777 PE=4 SV=1 ;
EVALUE=1e-159 ; Q/S_length_ratio=1.055"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|L0DAX5|L0DAX5_SINAD ;
ALN/Q_length_ratio=0.913 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2216 PE=4 SV=1
; EVALUE=1e-158 ; Q/S_length_ratio=1.060"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F0SK36|F0SK36_PLABD ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305
/ JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_2160 PE=4
SV=1 ; EVALUE=1e-158 ; Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A3ZS60|A3ZS60_9PLAN ;
ALN/Q_length_ratio=0.968 ; DESCRIPTION=Nitrogen
assimilation regulatory protein OS=Blastopirellula marina
DSM 3645 GN=DSM3645_14270 PE=4 SV=1 ; EVALUE=1e-155 ;
Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D5SRM9|D5SRM9_PLAL2 ;
ALN/Q_length_ratio=1.081 ; DESCRIPTION=Sigma-54 factor
interaction domain-containing protein OS=Planctomyces
limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 /
290) GN=Plim_0716 PE=4 SV=1 ; EVALUE=1e-154 ;
Q/S_length_ratio=0.912"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5RVU1|M5RVU1_9PLAN ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula maiorica SM1 GN=RMSM_03548 PE=4 SV=1 ;
EVALUE=1e-153 ; Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5RS05|M5RS05_9PLAN ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula maiorica SM1 GN=RMSM_00953 PE=4 SV=1 ;
EVALUE=1e-152 ; Q/S_length_ratio=0.890"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M5RKN9|M5RKN9_9PLAN ;
ALN/Q_length_ratio=0.949 ; DESCRIPTION=Two component
sigma54 specific Fis family transcriptional regulator
OS=Rhodopirellula maiorica SM1 GN=RMSM_07141 PE=4 SV=1 ;
EVALUE=1e-149 ; Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|F2B0C5|F2B0C5_RHOBT ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=Nitrogen regulation
protein NR(I) OS=Rhodopirellula baltica WH47
GN=RBWH47_00006 PE=4 SV=1 ; EVALUE=1e-147 ;
Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|L7CDR0|L7CDR0_RHOBT ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula baltica SWK14 GN=RBSWK_03668 PE=4 SV=1 ;
EVALUE=1e-147 ; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|K5D560|K5D560_RHOBT ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula baltica SH28 GN=RBSH_02880 PE=4 SV=1 ;
EVALUE=1e-147 ; Q/S_length_ratio=1.029"
/note="Pfam_scan:hit_1 (4..114);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:109; HMM_Length:112;
EVALUE:1.4e-25; BITSCORE: 89.4"
/note="Pfam_scan:hit_2 (142..309);
Pfam:PF00158.21:Sigma54_activat;
Pfam_type:Domain;HMM_aln_Length:167; HMM_Length:168;
EVALUE:8.2e-70; BITSCORE: 233.6"
/note="Pfam_scan:hit_3 (439..479); Pfam:PF02954.14:HTH_8;
Pfam_type:Domain;HMM_aln_Length:38; HMM_Length:42;
EVALUE:1.7e-11; BITSCORE: 43.4"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0007165"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008134"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MPLLLLIDDE PAIQHAFKKA FYPPNYETLA ARTASEGVAL FAERKPDVVV LDVNLPDSSG
61 LQTFDRIKQI DARTPVILIT GHGTTDLAIQ AMKRGAFDYL PKPLPFEQLR ELIGRAAEVS
121 RLMNVPAVVA ETTPAPADAD ALVGRCPAMH EVYKAIGRVA GTDATVLILG DTGTGKELVA
181 RAIYQHGNRA DKPFLAVNCG AIPEPLLESE LFGHEKGAFT GADRKRIGKF EQCTGGTLFL
241 DELGELPLLS QVKLLRAIQE QRFERVGGTE TLQTDVRVIA ATNADLEKLV AQGRFRSDLY
301 FRLNVFTIEL PSLRQRGDDI DLLTDYYLNR FASEFGRPVP IVSPEFRDAL RRYRWPGNIR
361 ELQSVLKQGM LKMSGGILLP DVLASLQKEV AVQPTETPAG NGSAPVPVPA VPNRPALDWD
421 QFIAERLDAG SRELYSECLT VLERQLLTRV LERTGGNQLR AAELLGITRG SLRHKLRALG
481 LTIERSLSAD DDHAD
//