LOCUS VTR93628.1 796 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana ribonucleoside-diphosphate reductase
: Ribonucleoside-diphosphate reductase OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_0900 PE=3 SV=1: ATP-cone: Ribonuc_red_lgN:
Ribonuc_red_lgC protein.
ACCESSION LR593886-2929
PROTEIN_ID VTR93628.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_40860"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L7UD22|L7UD22_MYXSD ;
ALN/Q_length_ratio=1.011 ;
DESCRIPTION=Ribonucleoside-diphosphate reductase
OS=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 /
Mx s8) GN=MYSTI_05549 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.956"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|G2LKB8|G2LKB8_CHLTF ;
ALN/Q_length_ratio=0.985 ;
DESCRIPTION=Ribonucleoside-diphosphate reductase
OS=Chloracidobacterium thermophilum (strain B)
GN=Cabther_B0607 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.995"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F8CDM4|F8CDM4_MYXFH ;
ALN/Q_length_ratio=0.986 ;
DESCRIPTION=Ribonucleoside-diphosphate reductase
OS=Myxococcus fulvus (strain ATCC BAA-855 / HW-1)
GN=LILAB_33165 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.950"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|C1F9F4|C1F9F4_ACIC5 ;
ALN/Q_length_ratio=0.991 ;
DESCRIPTION=Ribonucleoside-diphosphate reductase
OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM
11244 / JCM 7670) GN=ACP_2111 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.005"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|E3FXI7|E3FXI7_STIAD ;
ALN/Q_length_ratio=1.040 ;
DESCRIPTION=Ribonucleoside-diphosphate reductase
OS=Stigmatella aurantiaca (strain DW4/3-1) GN=nrdA PE=3
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.946"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|S4XH91|S4XH91_SORCE ;
ALN/Q_length_ratio=0.986 ;
DESCRIPTION=Ribonucleoside-diphosphate reductase
OS=Sorangium cellulosum So0157-2 GN=SCE1572_23275 PE=3
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.978"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q08SG6|Q08SG6_STIAD ;
ALN/Q_length_ratio=1.005 ;
DESCRIPTION=Ribonucleoside-diphosphate reductase
OS=Stigmatella aurantiaca (strain DW4/3-1) GN=STIAU_0964
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.995"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|Q1D2B1|Q1D2B1_MYXXD ;
ALN/Q_length_ratio=0.986 ;
DESCRIPTION=Ribonucleoside-diphosphate reductase
OS=Myxococcus xanthus (strain DK 1622) GN=MXAN_5057 PE=3
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A085WX36|A0A085WX36_9DELT ;
ALN/Q_length_ratio=1.010 ;
DESCRIPTION=Ribonucleoside-diphosphate reductase
OS=Hyalangium minutum GN=DB31_0511 PE=3 SV=1 ; EVALUE=0.0
; Q/S_length_ratio=0.949"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|H8MPH5|H8MPH5_CORCM ;
ALN/Q_length_ratio=1.018 ;
DESCRIPTION=Ribonucleoside-diphosphate reductase
OS=Corallococcus coralloides (strain ATCC 25202 / DSM 2259
/ NBRC 100086 / M2) GN=nrdA PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.967"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|S9PK98|S9PK98_9DELT ;
ALN/Q_length_ratio=0.994 ;
DESCRIPTION=Ribonucleoside-diphosphate reductase
OS=Cystobacter fuscus DSM 2262 GN=D187_000077 PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M4VQW7|M4VQW7_9DELT ;
ALN/Q_length_ratio=0.980 ;
DESCRIPTION=Ribonucleoside-diphosphate reductase
OS=Bdellovibrio exovorus JSS GN=A11Q_1333 PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.990"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A085X1Y2|A0A085X1Y2_9DELT ;
ALN/Q_length_ratio=1.010 ;
DESCRIPTION=Ribonucleoside-diphosphate reductase
OS=Enhygromyxa salina GN=DB30_7471 PE=3 SV=1 ; EVALUE=0.0
; Q/S_length_ratio=0.949"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|U2SF37|U2SF37_9DELT ;
ALN/Q_length_ratio=1.009 ;
DESCRIPTION=Ribonucleoside-diphosphate reductase
OS=Myxococcus sp. (contaminant ex DSM 436) GN=A176_02045
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.951"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0D8W3|L0D8W3_SINAD ;
ALN/Q_length_ratio=0.982 ;
DESCRIPTION=Ribonucleoside-diphosphate reductase
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_0900 PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.994"
/note="Pfam_scan:hit_1 (27..113);
Pfam:PF03477.11:ATP-cone;
Pfam_type:Domain;HMM_aln_Length:87; HMM_Length:90;
EVALUE:1.6e-10; BITSCORE: 41.2"
/note="Pfam_scan:hit_2 (160..233);
Pfam:PF00317.16:Ribonuc_red_lgN;
Pfam_type:Domain;HMM_aln_Length:80; HMM_Length:83;
EVALUE:8.8e-18; BITSCORE: 63.8"
/note="Pfam_scan:hit_3 (235..758);
Pfam:PF02867.10:Ribonuc_red_lgC;
Pfam_type:Family;HMM_aln_Length:537; HMM_Length:538;
EVALUE:4.9e-191; BITSCORE: 635.9"
/note="GO_domain:GO:0044281"
/note="GO_domain:GO:0016491"
/note="GO_domain:GO:0005737"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0006259"
/note="Enzyme_Code:EC:1.17.4"
/note="Enzyme_Code:EC:1.17.4.1"
BEGIN
1 MTTSTVERTV TPPPVSPSRF PDPQAIMKVR KRNGALEDVN VNKIVRAVQR CAGGLPTVDP
61 MRVAVKTIGG LYDGATTAEL DRLSIQTAAG LIAEEPEYSR LAARLLSTYI DKEVTNQDVH
121 SFSQSIAAGY RHGLVAEGAF AFVSANARKL NAAAGEQQPD LFEYFGLRTV YDRYLLRHPE
181 TRHVIETPAF FFLRVACGLA DSAADAIELF RLMAAHRYLP STPTLFNSGT ARPQMSSCYL
241 LDSPTDDLEA IYDRYTDVAK LSKFAGGIGL AYHRIRSRGS LIRGTNGHSN GIVPWLKTLD
301 SSVAAVNQGG KRKGACCVYL ESWHADVEEF LELRDNTGDA ARRTYNLNLA NWVPDLFMRR
361 VESGEEWSLF DPKVVPHLTD LFSEAFDVAY VEAEKRGLAA KRVPARDLYA RMMKTLAETG
421 NGWMTFKDAC NRTCNQTAAD GTVVHSSNLC TEIVEVTSAG ETAVCNLGSV NLARHVTADG
481 FDFDALAETV RTAVRFLDRV IDVNFYPTSA AATSNARWRP VGLGVMGLQD VFFKLKLPFD
541 APAARDLSRR IQEEIYYHAL ATSCDLAEAR GAHPSFAETR AAIGTLQFDM WGVTPTEPAR
601 WDALRARIRA HGLRNSLLVA IAPTATIASI VGAYECIEPQ VSNLFKRETL SGEFLQVNRY
661 LVNDLKSLGL WNDAVRAKIK LADGSVQGLD ELPGHLRAVY RTAWEVPMRA LIDMAADRGP
721 YIDQSQSLNL FLESPTIGKM SSMYMHAWKR GLKTTYYLRS RPATSIAKTT VTKAAPADTT
781 AVTCSLENPG SCEACQ
//