LOCUS VTR93599.1 919 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana crispr-associated helicase cas3 : CRISPR-
associated helicase Cas3 OS=Geobacter sulfurreducens (
strain ATCC 51573 / DSM 12127 / PCA) GN=cas3-1 PE=4 SV=
1: ResIII: Helicase_C protein.
ACCESSION LR593886-2900
PROTEIN_ID VTR93599.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_41150"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D5ST11|D5ST11_PLAL2 ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=CRISPR-associated
helicase Cas3, Anaes-subtype OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_3147 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|Q74H42|Q74H42_GEOSL ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=CRISPR-associated
helicase Cas3 OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=cas3-1 PE=4 SV=1 ; EVALUE=0.0
; Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|J6UDL1|J6UDL1_9RHOB ;
ALN/Q_length_ratio=0.990 ; DESCRIPTION=CRISPR-associated
HD domain protein OS=Rhodovulum sp. PH10 GN=A33M_3014 PE=4
SV=1 ; EVALUE=1e-148 ; Q/S_length_ratio=0.971"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|I0K1I0|I0K1I0_9BACT ;
ALN/Q_length_ratio=0.902 ; DESCRIPTION=Uncharacterized
protein OS=Methylacidiphilum fumariolicum SolV
GN=MFUM_980017 PE=4 SV=1 ; EVALUE=1e-109 ;
Q/S_length_ratio=1.106"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|N6ZS09|N6ZS09_9RHOO ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=CRISPR-associatedhD
domain-containing protein OS=Thauera phenylacetica B4P
GN=C667_09568 PE=4 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=1.011"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A068JPI1|A0A068JPI1_9DELT ;
ALN/Q_length_ratio=0.931 ; DESCRIPTION=Uncharacterized
protein OS=Desulfonatronum thiodismutans GN=GY33_18275
PE=4 SV=1 ; EVALUE=1e-104 ; Q/S_length_ratio=1.062"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|W0DMN2|W0DMN2_9GAMM ;
ALN/Q_length_ratio=0.909 ; DESCRIPTION=Uncharacterized
protein OS=Thioalkalivibrio thiocyanoxidans ARh 4
GN=THITH_01670 PE=4 SV=1 ; EVALUE=3e-93 ;
Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|B6ITM0|B6ITM0_RHOCS ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=CRISPR-associatedhD
domain protein, putative OS=Rhodospirillum centenum
(strain ATCC 51521 / SW) GN=RC1_1925 PE=4 SV=1 ;
EVALUE=5e-91 ; Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|W4MBA2|W4MBA2_9DELT ;
ALN/Q_length_ratio=0.579 ; DESCRIPTION=Uncharacterized
protein OS=Candidatus Entotheonella sp. TSY2
GN=ETSY2_12725 PE=4 SV=1 ; EVALUE=7e-72 ;
Q/S_length_ratio=1.724"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|W0E3W2|W0E3W2_MARPU ;
ALN/Q_length_ratio=0.859 ; DESCRIPTION=Uncharacterized
protein OS=Marichromatium purpuratum 984 GN=MARPU_11285
PE=4 SV=1 ; EVALUE=2e-61 ; Q/S_length_ratio=1.139"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A9GQD0|A9GQD0_SORC5 ;
ALN/Q_length_ratio=1.050 ; DESCRIPTION=Uncharacterized
protein OS=Sorangium cellulosum (strain So ce56)
GN=sce0266 PE=4 SV=1 ; EVALUE=1e-56 ;
Q/S_length_ratio=0.918"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|S4XNU3|S4XNU3_SORCE ;
ALN/Q_length_ratio=1.071 ; DESCRIPTION=Uncharacterized
protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_02230
PE=4 SV=1 ; EVALUE=5e-56 ; Q/S_length_ratio=0.920"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|K5BCL8|K5BCL8_9MYCO ;
ALN/Q_length_ratio=0.692 ; DESCRIPTION=CRISPR-associated
endonuclease Cas3-HD OS=Mycobacterium hassiacum DSM 44199
GN=C731_0636 PE=4 SV=1 ; EVALUE=2e-45 ;
Q/S_length_ratio=0.910"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|E6Q6Q2|E6Q6Q2_9ZZZZ ;
ALN/Q_length_ratio=1.077 ; DESCRIPTION=Putative
CRISPR-associated helicase Cas3,Anaes-subtype OS=mine
drainage metagenome GN=CARN4_1242 PE=4 SV=1 ; EVALUE=3e-44
; Q/S_length_ratio=0.868"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D0MKL2|D0MKL2_RHOM4 ;
ALN/Q_length_ratio=0.425 ; DESCRIPTION=CRISPR-associated
helicase Cas3, Anaes-subtype OS=Rhodothermus marinus
(strain ATCC 43812 / DSM 4252 / R-10) GN=Rmar_2808 PE=4
SV=1 ; EVALUE=2e-42 ; Q/S_length_ratio=0.985"
/note="Pfam_scan:hit_1 (17..228); Pfam:PF04851.10:ResIII;
Pfam_type:Family;HMM_aln_Length:153; HMM_Length:184;
EVALUE:1.9e-05; BITSCORE: 24.5"
/note="Pfam_scan:hit_2 (300..387);
Pfam:PF00271.26:Helicase_C;
Pfam_type:Family;HMM_aln_Length:74; HMM_Length:78;
EVALUE:0.00066; BITSCORE: 19.4"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0043167"
BEGIN
1 MADINFDAAF EALTGNAPFP WQRALYERFT ADRKDNIPES CNLPTGLGKT SVIAVWLIAL
61 ATHPTKMPRR LVYVVNRRTV VDQTTDEVVK IRERLPKAPQ IQDALWELCA VRPDKPDPEN
121 DRPLAISTLR GQFADNREWS ADPSRPAVIC GTVDMIGSRL LFSGYGIGRY DRTHQVGFLG
181 CDTLLVHDEA HLTDPFQQLL AAIRRNQWAE QVANRNLRVL ELTATSRRGS DAPAPFTLSP
241 TDETHPVVAE RLTAGKTIRL HTSERITLDI TKLATEYRLS GRAILVFVQT PDQVNEVVAA
301 LKKLEGVSVC ALTGTMRGYN RDRLVDCDST FARYLPKPKI DPAPGTVYLV CTSAGEVGVD
361 LSADHLICDL TTFESMAQRF GRVNRRGGRD PLTNELRHAY IDVVHEPKID TATPRGERRE
421 RTWKLLERLV DEFNGSASPN SLRMNLTEAE KNEAFAPAVP CLETTEFLLD TWALTTITDD
481 LPGRPPVAPW LHGVEPPDQP TTAFAWRTEV ESLALPVGTP SETVEEREKE IVAYLEEYPL
541 LVHEQLAEKT ARLVSVPNTD TVETGRRQQL KEFAKRGTEH SAWLIDANGR VDLTTIGKLA
601 ESSFTELMGR TVVLPPSAGG LSAAGMLDGR EANEAGREYD VADWVPNGGT QTRYREFQFT
661 NEDGILIPRP VIGERLDSNN REGRQYCEVA DIVTVENAEG DVTGRFVAFV ATDALSGERS
721 RSQQSSLKQF LDDHLTQAEH YATVLAERVL PAGPEQVAVK LAAKWHDLGK NRRVWQRGIG
781 NPPPPPIGDW RPLAKSGSRG RIFGLNDYRH EFGSLLDVRD LDEFKQCPEE VRELVLHLIA
841 AHHGRARPHF PVDLKRDPPC NEAFDPEPRG RDEQAMAREI PQRFAKLQRK YGRWGLAHLE
901 SLVRAADILA SQRPREGGK
//