LOCUS VTR93598.1 94 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana crispr-associated protein cas2 : CRISPR-
associated endoribonuclease Cas2 OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=cas2 PE=3 SV=1: CRISPR_Cas2 protein.
ACCESSION LR593886-2899
PROTEIN_ID VTR93598.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_41160"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DCE2|L0DCE2_SINAD ;
ALN/Q_length_ratio=0.660 ; DESCRIPTION=CRISPR-associated
endoribonuclease Cas2 OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=cas2
PE=3 SV=1 ; EVALUE=2e-23 ; Q/S_length_ratio=1.119"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|G2SLM3|G2SLM3_RHOMR ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=CRISPR-associated
endoribonuclease Cas2 OS=Rhodothermus marinus
SG0.5JP17-172 GN=cas2 PE=3 SV=1 ; EVALUE=6e-15 ;
Q/S_length_ratio=1.011"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|K1XRY7|K1XRY7_9BACT ;
ALN/Q_length_ratio=0.819 ; DESCRIPTION=CRISPR-associated
endoribonuclease Cas2 OS=uncultured bacterium GN=cas2 PE=3
SV=1 ; EVALUE=1e-14 ; Q/S_length_ratio=0.870"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D0MKP3|D0MKP3_RHOM4 ;
ALN/Q_length_ratio=0.851 ; DESCRIPTION=CRISPR-associated
endoribonuclease Cas2 OS=Rhodothermus marinus (strain ATCC
43812 / DSM 4252 / R-10) GN=cas2 PE=3 SV=1 ; EVALUE=1e-14
; Q/S_length_ratio=1.011"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|E8QZH7|E8QZH7_ISOPI ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=CRISPR-associated
endoribonuclease Cas2 OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=cas2 PE=3 SV=1 ; EVALUE=1e-13
; Q/S_length_ratio=0.969"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F8DGI3|F8DGI3_STREP ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=CRISPR-associated
endoribonuclease Cas2 OS=Streptococcus parasanguinis
(strain ATCC 15912 / DSM 6778 / CIP 104372 / LMG 14537)
GN=cas2 PE=3 SV=1 ; EVALUE=5e-13 ; Q/S_length_ratio=0.969"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M3UWT2|M3UWT2_9ACTO ;
ALN/Q_length_ratio=0.862 ; DESCRIPTION=CRISPR-associated
endoribonuclease Cas2 OS=Gordonia paraffinivorans NBRC
108238 GN=cas2 PE=3 SV=1 ; EVALUE=7e-13 ;
Q/S_length_ratio=0.989"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|W0J249|W0J249_9BACT ;
ALN/Q_length_ratio=0.936 ; DESCRIPTION=CRISPR-associated
endoribonuclease Cas2 OS=Opitutaceae bacterium TAV5
GN=cas2 PE=3 SV=1 ; EVALUE=1e-12 ; Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|V4J6Y1|V4J6Y1_9DELT ;
ALN/Q_length_ratio=0.819 ; DESCRIPTION=CRISPR-associated
endoribonuclease Cas2 OS=uncultured Desulfofustis sp.
PB-SRB1 GN=cas2 PE=3 SV=1 ; EVALUE=3e-12 ;
Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|I6ANQ1|I6ANQ1_9BACT ;
ALN/Q_length_ratio=0.936 ; DESCRIPTION=CRISPR-associated
endoribonuclease Cas2 OS=Opitutaceae bacterium TAV1
GN=cas2 PE=3 SV=1 ; EVALUE=3e-12 ; Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|D0LSX0|D0LSX0_HALO1 ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=CRISPR-associated
endoribonuclease Cas2 OS=Haliangium ochraceum (strain DSM
14365 / JCM 11303 / SMP-2) GN=cas2 PE=3 SV=1 ;
EVALUE=4e-12 ; Q/S_length_ratio=0.959"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K2GKM2|K2GKM2_9RHOB ;
ALN/Q_length_ratio=0.936 ; DESCRIPTION=CRISPR-associated
endoribonuclease Cas2 OS=Oceaniovalibus guishaninsula
JLT2003 GN=cas2 PE=3 SV=1 ; EVALUE=1e-11 ;
Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|N0C641|N0C641_9STRE ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=CRISPR-associated
endoribonuclease Cas2 OS=Streptococcus oligofermentans AS
1.3089 GN=cas2 PE=3 SV=1 ; EVALUE=2e-11 ;
Q/S_length_ratio=0.969"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A060AV03|A0A060AV03_STRSZ ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=CRISPR-associated
endoribonuclease Cas2 OS=Streptococcus equi subsp.
zooepidemicus CY GN=cas2 PE=3 SV=1 ; EVALUE=2e-11 ;
Q/S_length_ratio=0.969"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F8IMA5|F8IMA5_STREC ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=CRISPR-associated
endoribonuclease Cas2 OS=Streptococcus equi subsp.
zooepidemicus (strain ATCC 35246 / C74-63) GN=cas2 PE=3
SV=1 ; EVALUE=2e-11 ; Q/S_length_ratio=0.969"
/note="Pfam_scan:hit_1 (1..78);
Pfam:PF09827.4:CRISPR_Cas2;
Pfam_type:Family;HMM_aln_Length:75; HMM_Length:78;
EVALUE:4.2e-20; BITSCORE: 71.6"
/note="GO_domain:GO:0051276"
/note="GO_domain:GO:0004518"
/note="GO_domain:GO:0006259"
/note="Enzyme_Code:EC:3.1"
BEGIN
1 MDSYLVCYDI SNPKRLRRVA RTCEDFGYRK QLSVFLVRVG ATDFVRLRSR LYDIIDLNED
61 QVLFLPLTET SLQRMEAIGR PTDAYDKNDV VMIL
//