LOCUS VTR93597.1 569 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana CRISPR-associated endonuclease Cas1
OS=Hydrocarboniphaga effusa AP103 GN=cas1 PE=3 SV=1: Cas_Cas4:
Cas_Cas1 protein.
ACCESSION LR593886-2898
PROTEIN_ID VTR93597.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_41170"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|I8TCJ1|I8TCJ1_9GAMM ;
ALN/Q_length_ratio=0.965 ; DESCRIPTION=CRISPR-associated
endonuclease Cas1 OS=Hydrocarboniphaga effusa AP103
GN=cas1 PE=3 SV=1 ; EVALUE=1e-125 ;
Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|N6ZS15|N6ZS15_9RHOO ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=CRISPR-associated
endonuclease Cas1 OS=Thauera phenylacetica B4P GN=cas1
PE=3 SV=1 ; EVALUE=1e-123 ; Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_2 ; ACCESSION=Q74H36 ;
ALN/Q_length_ratio=0.965 ; DESCRIPTION=CRISPR-associated
exonuclease Cas4/endonuclease Cas1 fusion OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=cas4-cas1 PE=3 SV=1 ; EVALUE=1e-123 ;
Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A068JNV2|A0A068JNV2_9DELT ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=CRISPR-associated
endonuclease Cas1 OS=Desulfonatronum thiodismutans GN=cas1
PE=3 SV=1 ; EVALUE=1e-123 ; Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|I4WFB0|I4WFB0_9GAMM ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=CRISPR-associated
endonuclease Cas1 OS=Rhodanobacter thiooxydans LCS2
GN=cas1 PE=3 SV=1 ; EVALUE=1e-122 ;
Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|I4WMT7|I4WMT7_9GAMM ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=CRISPR-associated
endonuclease Cas1 OS=Rhodanobacter denitrificans GN=cas1
PE=3 SV=1 ; EVALUE=1e-122 ; Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|T0LF50|T0LF50_9EURY ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=CRISPR-associated
endonuclease Cas1 OS=Thermoplasmatales archaeon E-plasma
GN=cas1 PE=3 SV=1 ; EVALUE=1e-122 ;
Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|N6YAB3|N6YAB3_9RHOO ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=CRISPR-associated
endonuclease Cas1 OS=Thauera aminoaromatica S2 GN=cas1
PE=3 SV=1 ; EVALUE=1e-121 ; Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|J3B795|J3B795_9BACL ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=CRISPR-associated
endonuclease Cas1 OS=Brevibacillus sp. CF112 GN=cas1 PE=3
SV=1 ; EVALUE=1e-121 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D0MKV7|D0MKV7_RHOM4 ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=CRISPR-associated
endonuclease Cas1 OS=Rhodothermus marinus (strain ATCC
43812 / DSM 4252 / R-10) GN=cas1 PE=3 SV=1 ; EVALUE=1e-121
; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|E8QZH6|E8QZH6_ISOPI ;
ALN/Q_length_ratio=1.018 ; DESCRIPTION=CRISPR-associated
protein Cas1 OS=Isosphaera pallida (strain ATCC 43644 /
DSM 9630 / IS1B) GN=Isop_0510 PE=3 SV=1 ; EVALUE=1e-121 ;
Q/S_length_ratio=0.831"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|C8W2P4|C8W2P4_DESAS ;
ALN/Q_length_ratio=0.937 ; DESCRIPTION=CRISPR-associated
endonuclease Cas1 OS=Desulfotomaculum acetoxidans (strain
ATCC 49208 / DSM 771 / VKM B-1644) GN=cas1 PE=3 SV=1 ;
EVALUE=1e-119 ; Q/S_length_ratio=1.044"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|B8GLF6|B8GLF6_THISH ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=CRISPR-associated
endonuclease Cas1 OS=Thioalkalivibrio sulfidiphilus
(strain HL-EbGR7) GN=cas1 PE=3 SV=1 ; EVALUE=1e-119 ;
Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D5SVZ0|D5SVZ0_PLAL2 ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=CRISPR-associated
endonuclease Cas1 OS=Planctomyces limnophilus (strain ATCC
43296 / DSM 3776 / IFAM 1008 / 290) GN=cas1 PE=3 SV=1 ;
EVALUE=1e-119 ; Q/S_length_ratio=0.952"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|G2LLL6|G2LLL6_CHLTF ;
ALN/Q_length_ratio=1.014 ; DESCRIPTION=CRISPR-associated
endonuclease Cas1 OS=Chloracidobacterium thermophilum
(strain B) GN=cas1 PE=3 SV=1 ; EVALUE=1e-118 ;
Q/S_length_ratio=0.979"
/note="Pfam_scan:hit_1 (9..200); Pfam:PF01930.12:Cas_Cas4;
Pfam_type:Family;HMM_aln_Length:158; HMM_Length:162;
EVALUE:3.8e-16; BITSCORE: 59.4"
/note="Pfam_scan:hit_2 (234..525);
Pfam:PF01867.11:Cas_Cas1;
Pfam_type:Family;HMM_aln_Length:280; HMM_Length:282;
EVALUE:2e-91; BITSCORE: 305.9"
BEGIN
1 MSATTDPIPV RALNQVTYCP RLYYLQYVDA VMPTNEHVEG GLHDHRRVDA PDLKNKTRTD
61 RGTATSRGIA LSSEALGISG ILDVIEEKNG EQYPVETKHG PAPHDGDGQP TVWDNDAVQI
121 CAQAMLMEEA FGKPVPRGYQ FHVGSRERVP LELTPELRQK TRDAVTRCRE LAVLDAPPDP
181 LPSELRHRCF GCSLAPVCLP EETLYQLGHP APVKTEDAPP ELKRVIPQSD DGAVLYLQEP
241 GSSVGKRSEH LVIKKDGKEM SRVPMHAVRQ VVVCGNVQVS TQALETLATN DIPVSYVTGH
301 GRFIGTFSPA PAKNVSLREA QFRKFSDPVA CLELSKAVVR AKLANQRALL MRSLRGEEEA
361 RGSHEPAARG IYGLLGVLDD QTSVDSVLGI EGQGAALYFG EFGRFLKQPP TGKRFDFTSR
421 NRRPPRDPVN ALLSFAYAML AKDCFAAACT VGFDPYKGFF HQGRHGKPSL ALDLMEEFRS
481 VIADSVVLTL INNETLTPDD FITWRDACNL TESGRKAFFA AYEQRKSTVI THPLYNYKMS
541 YARMLEVQAR MLASFVRGST PTYTGFVVR
//