LOCUS VTR93587.1 411 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana tyrosine recombinase : Uncharacterized
protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_10342
PE=4 SV=1: Phage_integrase protein.
ACCESSION LR593886-2888
PROTEIN_ID VTR93587.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_41270"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A3ZM09|A3ZM09_9PLAN ;
ALN/Q_length_ratio=0.732 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_10342 PE=4 SV=1 ; EVALUE=2e-97 ;
Q/S_length_ratio=1.234"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M5T5X3|M5T5X3_9PLAN ;
ALN/Q_length_ratio=0.808 ; DESCRIPTION=Integrase family
protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_03018 PE=4
SV=1 ; EVALUE=1e-68 ; Q/S_length_ratio=1.209"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|K5D6I0|K5D6I0_RHOBT ;
ALN/Q_length_ratio=0.854 ; DESCRIPTION=Tyrosine
recombinase XerC OS=Rhodopirellula baltica SH28
GN=RBSH_02353 PE=4 SV=1 ; EVALUE=2e-68 ;
Q/S_length_ratio=1.135"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5UBZ8|M5UBZ8_9PLAN ;
ALN/Q_length_ratio=0.905 ;
DESCRIPTION=Integrase/recombinase OS=Rhodopirellula
sallentina SM41 GN=RSSM_05035 PE=4 SV=1 ; EVALUE=5e-66 ;
Q/S_length_ratio=1.065"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D8F2Q9|D8F2Q9_9DELT ;
ALN/Q_length_ratio=0.800 ; DESCRIPTION=Site-specific
recombinase, phage integrase family OS=delta
proteobacterium NaphS2 GN=NPH_0646 PE=4 SV=1 ;
EVALUE=8e-08 ; Q/S_length_ratio=1.096"
/note="Pfam_scan:hit_1 (196..380);
Pfam:PF00589.17:Phage_integrase;
Pfam_type:Family;HMM_aln_Length:148; HMM_Length:173;
EVALUE:5.1e-12; BITSCORE: 45.8"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MSKTDSTAHG FAGKPDKPYS DFPLFPHAAG VWAKKIRGKM HYFGPWNDPD GALKKYLEQK
61 DALHAGRKPR ATSEGVTVKD LANAYLNHKK ALLDAAELSQ HTWRNYQQAA ALIVERFGKS
121 RLVADLGPDD FAELRNWMAQ KWGAVRVRDF ITRVRGVFKY GHESELIAVP VRFGPGFKPP
181 TRKTLRLGRA EKGVRMFEAA EIRALLNGTT VQGKNGPKMV RAGVTVRAMI LLGVNCGFGN
241 ADCGTLPRSA LDLEGGWVNY HRPKTGITRR CPLWPETVAA LKDALDKRPE PKNPDDTALA
301 FLTVRGVSWH KTDLEDSTIS KEISKLVKAL GITGNKNFYA LRHTFETIGG EAKDQVAVDH
361 IMGHARDDMA SVYRERISDE RLKAVSDFVR KWVFGDLNKV DMNSEFPRAA G
//