LOCUS VTR93566.1 252 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana family transcriptional regulator :
Uncharacterized protein OS=Sorangium cellulosum So0157-
2 GN=SCE1572_29605 PE=4 SV=1: Response_reg: GerE protein.
ACCESSION LR593886-2867
PROTEIN_ID VTR93566.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_41480"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|S4Y246|S4Y246_SORCE ;
ALN/Q_length_ratio=0.837 ; DESCRIPTION=Uncharacterized
protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_29605
PE=4 SV=1 ; EVALUE=4e-62 ; Q/S_length_ratio=1.167"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|B1M5J4|B1M5J4_METRJ ;
ALN/Q_length_ratio=0.833 ; DESCRIPTION=Two component
transcriptional regulator, LuxR family OS=Methylobacterium
radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)
GN=Mrad2831_3042 PE=4 SV=1 ; EVALUE=3e-58 ;
Q/S_length_ratio=1.135"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A089NT86|A0A089NT86_9RHIZ ;
ALN/Q_length_ratio=0.833 ; DESCRIPTION=Two component LuxR
family transcriptional regulator OS=Methylobacterium
oryzae CBMB20 GN=MOC_3396 PE=4 SV=1 ; EVALUE=2e-57 ;
Q/S_length_ratio=1.140"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q2IST2|Q2IST2_RHOP2 ;
ALN/Q_length_ratio=0.889 ; DESCRIPTION=Two component
transcriptional regulator, LuxR family OS=Rhodopseudomonas
palustris (strain HaA2) GN=RPB_4035 PE=4 SV=1 ;
EVALUE=5e-57 ; Q/S_length_ratio=1.105"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|B3Q6C7|B3Q6C7_RHOPT ;
ALN/Q_length_ratio=0.873 ; DESCRIPTION=Two component
transcriptional regulator, LuxR family OS=Rhodopseudomonas
palustris (strain TIE-1) GN=Rpal_1676 PE=4 SV=1 ;
EVALUE=8e-57 ; Q/S_length_ratio=1.105"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Q6N9P9|Q6N9P9_RHOPA ;
ALN/Q_length_ratio=0.873 ; DESCRIPTION=Two-component
transcriptional regulator, LuxR family OS=Rhodopseudomonas
palustris (strain ATCC BAA-98 / CGA009) GN=RPA1489 PE=4
SV=1 ; EVALUE=8e-57 ; Q/S_length_ratio=1.130"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|B8EPV5|B8EPV5_METSB ;
ALN/Q_length_ratio=0.837 ; DESCRIPTION=Two component
transcriptional regulator, LuxR family OS=Methylocella
silvestris (strain BL2 / DSM 15510 / NCIMB 13906)
GN=Msil_2019 PE=4 SV=1 ; EVALUE=2e-55 ;
Q/S_length_ratio=1.130"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|C5B631|C5B631_METEA ;
ALN/Q_length_ratio=0.829 ; DESCRIPTION=DNA-binding
response regulator in two-component regulatory system wtih
UhpB OS=Methylobacterium extorquens (strain ATCC 14718 /
DSM 1338 / AM1) GN=uhpA PE=4 SV=1 ; EVALUE=3e-55 ;
Q/S_length_ratio=1.145"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|E6VJN8|E6VJN8_RHOPX ;
ALN/Q_length_ratio=0.873 ; DESCRIPTION=Two component
transcriptional regulator, LuxR family OS=Rhodopseudomonas
palustris (strain DX-1) GN=Rpdx1_4032 PE=4 SV=1 ;
EVALUE=5e-55 ; Q/S_length_ratio=1.130"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|B1Z8K6|B1Z8K6_METPB ;
ALN/Q_length_ratio=0.833 ; DESCRIPTION=Two component
transcriptional regulator, LuxR family OS=Methylobacterium
populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)
GN=Mpop_3747 PE=4 SV=1 ; EVALUE=6e-55 ;
Q/S_length_ratio=1.140"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A088B328|A0A088B328_9RHIZ ;
ALN/Q_length_ratio=0.833 ; DESCRIPTION=Two component
transcriptional regulator, LuxR family OS=Methylobacterium
oryzae CBMB20 GN=MOC_1p0123 PE=4 SV=1 ; EVALUE=2e-54 ;
Q/S_length_ratio=1.105"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q132H9|Q132H9_RHOPS ;
ALN/Q_length_ratio=0.841 ; DESCRIPTION=Two component
transcriptional regulator, LuxR family OS=Rhodopseudomonas
palustris (strain BisB5) GN=RPD_3789 PE=4 SV=1 ;
EVALUE=3e-54 ; Q/S_length_ratio=1.105"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|H0S9D1|H0S9D1_9BRAD ;
ALN/Q_length_ratio=0.837 ; DESCRIPTION=Two component
transcriptional regulator, LuxR family OS=Bradyrhizobium
sp. ORS 375 GN=BRAO375_1210017 PE=4 SV=1 ; EVALUE=1e-53 ;
Q/S_length_ratio=1.151"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|B0UCY9|B0UCY9_METS4 ;
ALN/Q_length_ratio=0.821 ; DESCRIPTION=Two component
transcriptional regulator, LuxR family OS=Methylobacterium
sp. (strain 4-46) GN=M446_5717 PE=4 SV=1 ; EVALUE=2e-53 ;
Q/S_length_ratio=1.145"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|E3I7B1|E3I7B1_RHOVT ;
ALN/Q_length_ratio=0.829 ; DESCRIPTION=Two component
transcriptional regulator, LuxR family OS=Rhodomicrobium
vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG
4299) GN=Rvan_1510 PE=4 SV=1 ; EVALUE=3e-53 ;
Q/S_length_ratio=1.151"
/note="Pfam_scan:hit_1 (29..141);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:111; HMM_Length:112;
EVALUE:5.8e-17; BITSCORE: 61.7"
/note="Pfam_scan:hit_2 (172..229); Pfam:PF00196.14:GerE;
Pfam_type:Domain;HMM_aln_Length:56; HMM_Length:58;
EVALUE:1.2e-18; BITSCORE: 66.1"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0007165"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
BEGIN
1 MSYPPAQGSG PLPHAPRENA PSRRPDATVL VADPHPVVRE GVKALLNAQP DMQVVGEAHD
61 GITALGLVAE LRPDVLILET DLPGLDGVQV AGQGHEVHPG CKPLVLTTCE QPGQVQLLFR
121 FGARGYVLKR APTEQLVQAV RTVAAGGTYL DPEVADYIVA SSHNPTETDG TADTLSNREL
181 LVMRLIALGY SNKEIAARLN LSVKTVETYK ARAMAKLELS TRADLMRHAI RNGWLSDEPE
241 LVLAVATGNR PE
//