LOCUS VTR93557.1 2512 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rhs repeat-associated core domain-containing
protein : YD repeat protein OS=Isosphaera pallida (strain
ATCC 43644 / DSM 9630 / IS1B) GN=Isop_2419 PE=4 SV=1:
VCBS: RHS_repeat protein.
ACCESSION LR593886-2858
PROTEIN_ID VTR93557.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_41570"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L0DA66|L0DA66_SINAD ;
ALN/Q_length_ratio=0.266 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_1341 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.126"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0D7A8|L0D7A8_SINAD ;
ALN/Q_length_ratio=0.350 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_0717 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.485"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0D5P0|L0D5P0_SINAD ;
ALN/Q_length_ratio=0.351 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_0291 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.159"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E8QWU3|E8QWU3_ISOPI ;
ALN/Q_length_ratio=0.427 ; DESCRIPTION=YD repeat protein
OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 /
IS1B) GN=Isop_2419 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L0D9R6|L0D9R6_SINAD ;
ALN/Q_length_ratio=0.413 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_1226 PE=4 SV=1 ; EVALUE=1e-123 ;
Q/S_length_ratio=1.101"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D5STB0|D5STB0_PLAL2 ;
ALN/Q_length_ratio=0.391 ; DESCRIPTION=AmoP
OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776
/ IFAM 1008 / 290) GN=Plim_1036 PE=4 SV=1 ; EVALUE=1e-121
; Q/S_length_ratio=1.335"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D5SST5|D5SST5_PLAL2 ;
ALN/Q_length_ratio=0.481 ; DESCRIPTION=YD repeat protein
OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776
/ IFAM 1008 / 290) GN=Plim_3067 PE=4 SV=1 ; EVALUE=1e-109
; Q/S_length_ratio=1.254"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D2QZZ5|D2QZZ5_PIRSD ;
ALN/Q_length_ratio=0.283 ; DESCRIPTION=YD repeat protein
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=Psta_3703 PE=4 SV=1 ; EVALUE=2e-83 ;
Q/S_length_ratio=1.230"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D5SQM4|D5SQM4_PLAL2 ;
ALN/Q_length_ratio=0.205 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_2663 PE=4 SV=1 ;
EVALUE=2e-80 ; Q/S_length_ratio=3.578"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D5SWT5|D5SWT5_PLAL2 ;
ALN/Q_length_ratio=0.200 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_1602 PE=4 SV=1 ;
EVALUE=6e-76 ; Q/S_length_ratio=3.336"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|D5SWT3|D5SWT3_PLAL2 ;
ALN/Q_length_ratio=0.143 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_1600 PE=4 SV=1 ;
EVALUE=8e-45 ; Q/S_length_ratio=4.138"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A3ZZ08|A3ZZ08_9PLAN ;
ALN/Q_length_ratio=0.220 ; DESCRIPTION=Uncharacterized
protein (Fragment) OS=Blastopirellula marina DSM 3645
GN=DSM3645_15255 PE=4 SV=1 ; EVALUE=1e-43 ;
Q/S_length_ratio=1.377"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F4KRN7|F4KRN7_HALH1 ;
ALN/Q_length_ratio=0.329 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Haliscomenobacter
hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O)
GN=Halhy_1128 PE=4 SV=1 ; EVALUE=3e-35 ;
Q/S_length_ratio=1.854"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|Q1Q7C5|Q1Q7C5_9BACT ;
ALN/Q_length_ratio=0.404 ; DESCRIPTION=Similar to
wall-associated protein OS=Candidatus Kuenenia
stuttgartiensis GN=WapA PE=4 SV=1 ; EVALUE=4e-35 ;
Q/S_length_ratio=1.196"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5RJJ3|M5RJJ3_9PLAN ;
ALN/Q_length_ratio=0.122 ; DESCRIPTION=Hemolysin-type
calcium-binding region domain protein OS=Rhodopirellula
maiorica SM1 GN=RMSM_03614 PE=4 SV=1 ; EVALUE=2e-31 ;
Q/S_length_ratio=1.027"
/note="Pfam_scan:hit_1 (107..174); Pfam:PF13517.1:VCBS;
Pfam_type:Repeat;HMM_aln_Length:59; HMM_Length:61;
EVALUE:1.9e-06; BITSCORE: 28.1"
/note="Pfam_scan:hit_2 (2143..2181);
Pfam:PF05593.9:RHS_repeat;
Pfam_type:Repeat;HMM_aln_Length:35; HMM_Length:38;
EVALUE:9.2e-06; BITSCORE: 25.6"
/note="GO_domain:GO:0008150"
BEGIN
1 MSLSSPARIP SRFTMFARLV ALRERIAGLF RAAPRTSARP VRLGVEAMEE RLVPDGRPLP
61 YPVIFAGSGV GEAAVVKAYD ADTGNLRWTK SVYGPLFTGG VRVATADFTG DGIPDAVVAP
121 GSGYVPLVRV LDGTTGNEIS GPLGHFLAYS SLNTGGVHVA AADVNGDGKA DAITTADSLL
181 GTRARAFSGA NGQMLLNWNL TGAPFAAGAT VGAVDLNGDH KAEVILGGSS GGWVKAYDPT
241 TGAPISGPLG SFQAFGTGYT GSVFVNSDSL TNDVDGDGTP DLVVGTGAGA TAQVKVFSGA
301 TGGVLYDFQP FGSGFTGGAR VALAYADDDD RADIVVGSGP GAADVRVFSG ATGLQLTSPL
361 GQYAPFGSST GGVFVAASND PASPLRTDYF NGSTSAPSLV GGQTLSVYST MYQVSFVPTG
421 TMTYTLYDGA SNLLGTWVQG LTVLSSTTST TSPFNVALPA GSFTLKAAYS GDAHWPPDAG
481 PSTILSATVS APSGPAPVAP SVPGPGLIEA PVGAGIGIVG DAPTGVDYGT GTITVDSCPD
541 LSSVALGDLF GLSRSWTSAA GYEDGLTGTG GSSGQFAHAV QVNGNDSVAL ALGGSDALFF
601 DYYGGAYHGR FGDPTALVHD TTNGLFVATD GTGRVLTFYD FSASTPSGRA GRLKTVADAD
661 GQATAVTSWD GNGRPSEVQR TTGSGGGALT ESFVYAYVGS GTNAGLLQSV TQRTKVGAGS
721 WSTVRSADYA YYDGTTGPGL AKALKSAVVK DASGTALSTS YYRYYTSGTG SSGKLKYAFS
781 NGSYDRLASA LGTGLDALTD AQVDDYADKY VEYNASGQAT KVVDAAAGCS VCAGGQGQFT
841 YAYATNSAAG LLDANVWKNK AVETLPDGST NTVYTNGFGQ AMLRVFTDTA SNVWRWYTKY
901 DSAGRVILEA GPSVVTGFSE SYADLVNFVS GNAQYLSDSA GLVTAYTYGS TTTATTPTAG
961 DALGYLKEVD LKQGETGTAV PQQVLAYIKN TVSSVDFFNL ASSTVYRNDN GTGAQTTSYA
1021 YTYLSGTNQI ASTVTTLPTV TAAQNGSNSA TTVTTVNDAF GHPVWTKDQA GIISYAQYDT
1081 LTGAVVKTIT DVDTTQAGTF ANLPSGWSTP SGAGLHLTTT YEVDALGRAT KVTYPNGRVD
1141 YTVYNDANQE VRSYAGWDST NNVPTGATTV SRMDRAGGYA ETLTMSAAPT VSGGRPTGAE
1201 SVAKVQSLSR AYTNAAGQTI YSDAYFNLSG LTYSTSTALG TEGVNFYRTR YQYDDQGRLN
1261 KTTSPQGTIS RTVYDSLGRA VSAWIGTDDT PTSGYWSPTN LTGTNTVKVA EYEYDGGGVG
1321 EGNLTKVTEI PGGGAANRVT QTWFDWRNRT VAVKSGAEGS ESTSVNRPLT YYDYDNLGEV
1381 TKARVYDADA VTPTVTGGVP QPLSSGLLRA QTTTNYDELG RAYRADVYSV DISTGSVATN
1441 TLYAQTWYDA RGQVSKTWAP GGTVQKTTYD GAGRAVATYT SDGGGDTGYS DADDVTGDTV
1501 LNQTEYVYDG NGSVLQVTTR ERFHDASGTG ALGTPTTGIG ARVSYTGYYY DLAGRTVAAV
1561 DVGTNGGSSW SRPGTVPSRS ATVLVSSTKY ATDAVQVIVL TGSPTGGTFA LSFGGSTTSA
1621 LAYNASAATV QAALAGLASI GSGNVQVSAA AGGGWEVRFI GTKAGTYQAA ITSNGAGLTG
1681 GTSPAASTST INAGGDAGHA AEVTDSAGHV SRTYADALGR TTRSVTNFVD GVVSDADDKS
1741 TGYAYNGAGM TSLIAYLTGG GVQTTGYVYG VTAATGSTIE SNDIARLTQW ADPTTGAASS
1801 SQQEAVAVNA LGQTLTSTDR NGSVHTLTYD VLGRVVSDAV TTLGSGVDGA VRRVETAYDG
1861 QGNAYLVTNY SAASGGSIVN QVQRAYNGLG QMTTEWQSHT GAVNTSTSPK VQYAYSEMAG
1921 GANHSRPASV TYPSGYVLTY NYSSGLNDSN SRLSSLSDST GTLESYDYLG LDTVVRRAHP
1981 QPNVDLSYIK RAGESNGDAG DQYTGLDRFG RVVDQRWLNP STGTATDRFQ YGYDQAGNRT
2041 YRDNLVNTAF GEVYSYDALD QLTGYSRGTL NGTKTGITGT VARSQGWDYD ALGNFDSVTT
2101 NGTAQTRTAN KQNEITGISG ATTPTYDANG DMTGDEAGQQ LVYDAWNRLV AVKNSGGTVL
2161 KTYTYDGLNR RTTETASGTT TDLFYSKDWQ VLEEKVGSAT KTRYVWSPVY VDAMVLRDRD
2221 ADGNTGNGLE ERLWAQQDAN WNVTALVNGS GAVVERYAYD PYGARTVYDA SYAVRGGGSA
2281 YNFAQGFQGM TFDATTGMGN QRARWYSPTI SRWGTTDPIQ FGSGDTNLYR FASGNPLNRI
2341 DPSGLTSLFI GIRPTDPSGV KIDIPRNSLL GLSLIARQIL PELYRSVAEY AREIKEILQS
2401 LPELRAKRDR GYEELEKYLK DNPCASPADI GKAARKAKDS ATPYEQARKR YNQLVEKAQE
2461 YIAMISLAER QATLGGGVPV ANDVDALRPT YHLMDWLEHL QPIGEPGQMK GD
//