LOCUS       VTR93555.1               749 aa    PRT              BCT 03-FEB-2020
DEFINITION  Gemmata massiliana sigma-70 family rna polymerase sigma
            factor : Uncharacterized protein OS=Isosphaera pallida
            (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_0849 PE=
            4 SV=1: Sigma70_r2: Sigma70_r4_2 protein.
ACCESSION   LR593886-2856
PROTEIN_ID  VTR93555.1
SOURCE      Gemmata massiliana
  ORGANISM  Gemmata massiliana
            Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
            Gemmata.
REFERENCE   1
  AUTHORS   
  CONSRTM   Science for Life Laboratories
  JOURNAL   Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
            MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
            Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES             Qualifiers
     source          /organism="Gemmata massiliana"
                     /chromosome="1"
                     /isolate="Soil9"
                     /mol_type="genomic DNA"
                     /isolation_source="soil"
                     /db_xref="taxon:1210884"
     protein         /locus_tag="SOIL9_41590"
                     /note="BLAST_uniprot:hit_1 ;
                     ACCESSION=tr|E8R2F4|E8R2F4_ISOPI ;
                     ALN/Q_length_ratio=0.306 ; DESCRIPTION=Uncharacterized
                     protein OS=Isosphaera pallida (strain ATCC 43644 / DSM
                     9630 / IS1B) GN=Isop_0849 PE=4 SV=1 ; EVALUE=6e-40 ;
                     Q/S_length_ratio=2.128"
                     /note="BLAST_uniprot:hit_2 ;
                     ACCESSION=tr|L0DK84|L0DK84_SINAD ;
                     ALN/Q_length_ratio=0.286 ; DESCRIPTION=Uncharacterized
                     protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392
                     / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5098 PE=4 SV=1
                     ; EVALUE=2e-34 ; Q/S_length_ratio=2.774"
                     /note="BLAST_uniprot:hit_3 ;
                     ACCESSION=tr|L0DGG0|L0DGG0_SINAD ;
                     ALN/Q_length_ratio=0.352 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_4264 PE=4 SV=1 ; EVALUE=3e-34 ;
                     Q/S_length_ratio=1.767"
                     /note="BLAST_uniprot:hit_4 ;
                     ACCESSION=tr|M5TSN3|M5TSN3_9PLAN ;
                     ALN/Q_length_ratio=0.283 ; DESCRIPTION=Uncharacterized
                     protein OS=Rhodopirellula sallentina SM41 GN=RSSM_06470
                     PE=4 SV=1 ; EVALUE=6e-34 ; Q/S_length_ratio=1.800"
                     /note="BLAST_uniprot:hit_5 ;
                     ACCESSION=tr|A3ZUA1|A3ZUA1_9PLAN ;
                     ALN/Q_length_ratio=0.292 ; DESCRIPTION=Uncharacterized
                     protein OS=Blastopirellula marina DSM 3645
                     GN=DSM3645_21729 PE=4 SV=1 ; EVALUE=1e-33 ;
                     Q/S_length_ratio=2.013"
                     /note="BLAST_uniprot:hit_6 ;
                     ACCESSION=tr|D2R4Q6|D2R4Q6_PIRSD ;
                     ALN/Q_length_ratio=0.307 ; DESCRIPTION=Uncharacterized
                     protein OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068
                     / ICPB 4128) GN=Psta_2453 PE=4 SV=1 ; EVALUE=4e-33 ;
                     Q/S_length_ratio=1.607"
                     /note="BLAST_uniprot:hit_7 ;
                     ACCESSION=tr|L0D7L2|L0D7L2_SINAD ;
                     ALN/Q_length_ratio=0.374 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_0185 PE=4 SV=1 ; EVALUE=6e-33 ;
                     Q/S_length_ratio=1.495"
                     /note="BLAST_uniprot:hit_8 ;
                     ACCESSION=tr|M5T6U6|M5T6U6_9PLAN ;
                     ALN/Q_length_ratio=0.284 ; DESCRIPTION=Uncharacterized
                     protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_02895 PE=4
                     SV=1 ; EVALUE=2e-32 ; Q/S_length_ratio=1.661"
                     /note="BLAST_uniprot:hit_9 ;
                     ACCESSION=tr|L0DQE6|L0DQE6_SINAD ;
                     ALN/Q_length_ratio=0.335 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_7079 PE=4 SV=1 ; EVALUE=6e-32 ;
                     Q/S_length_ratio=0.786"
                     /note="BLAST_uniprot:hit_10 ;
                     ACCESSION=tr|A6CDR4|A6CDR4_9PLAN ;
                     ALN/Q_length_ratio=0.290 ; DESCRIPTION=Uncharacterized
                     protein OS=Planctomyces maris DSM 8797 GN=PM8797T_08429
                     PE=4 SV=1 ; EVALUE=2e-31 ; Q/S_length_ratio=1.873"
                     /note="BLAST_uniprot:hit_11 ;
                     ACCESSION=tr|L0DJM8|L0DJM8_SINAD ;
                     ALN/Q_length_ratio=0.352 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_4894 PE=4 SV=1 ; EVALUE=2e-31 ;
                     Q/S_length_ratio=1.698"
                     /note="BLAST_uniprot:hit_12 ;
                     ACCESSION=tr|L0D6V6|L0D6V6_SINAD ;
                     ALN/Q_length_ratio=0.336 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_0102 PE=4 SV=1 ; EVALUE=3e-31 ;
                     Q/S_length_ratio=1.337"
                     /note="BLAST_uniprot:hit_14 ;
                     ACCESSION=tr|M5RX03|M5RX03_9PLAN ;
                     ALN/Q_length_ratio=0.314 ; DESCRIPTION=Uncharacterized
                     protein OS=Rhodopirellula europaea SH398 GN=RESH_05526
                     PE=4 SV=1 ; EVALUE=4e-31 ; Q/S_length_ratio=1.805"
                     /note="BLAST_uniprot:hit_13 ;
                     ACCESSION=tr|M2AVX0|M2AVX0_9PLAN ;
                     ALN/Q_length_ratio=0.314 ; DESCRIPTION=Uncharacterized
                     protein OS=Rhodopirellula europaea 6C GN=RE6C_05133 PE=4
                     SV=1 ; EVALUE=4e-31 ; Q/S_length_ratio=1.805"
                     /note="BLAST_uniprot:hit_15 ;
                     ACCESSION=tr|L7C9W2|L7C9W2_RHOBT ;
                     ALN/Q_length_ratio=0.314 ; DESCRIPTION=Uncharacterized
                     protein OS=Rhodopirellula baltica SWK14 GN=RBSWK_05477
                     PE=4 SV=1 ; EVALUE=6e-31 ; Q/S_length_ratio=1.805"
                     /note="Pfam_scan:hit_1 (37..103);
                     Pfam:PF04542.9:Sigma70_r2;
                     Pfam_type:Domain;HMM_aln_Length:69; HMM_Length:71;
                     EVALUE:8.8e-06; BITSCORE: 25.2"
                     /note="Pfam_scan:hit_2 (124..177);
                     Pfam:PF08281.7:Sigma70_r4_2;
                     Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54;
                     EVALUE:3.9e-08; BITSCORE: 32.6"
                     /note="GO_domain:GO:0003677"
                     /note="GO_domain:GO:0001071"
                     /note="GO_domain:GO:0000988"
                     /note="GO_domain:GO:0034641"
                     /note="GO_domain:GO:0009058"
                     /note="GO_domain:GO:0043234"
                     /note="GO_domain:GO:0005622"
BEGIN
        1 MPGRVLELLH AATPDTPDAD LLARFVATRD EGAFADLVRA HGPAVYRVCR RLAPRHADDA
       61 FQATFLVLAC RAGAVRKASS VGSWLIGAAG RVARQMTRRE RRSADVCATL ARPDDRNSGA
      121 AELSATLDDE LSRLPDRLRA PLVSCFLYGR TQEQAATELD VSVRTLRRRL ERAKALLRLR
      181 LERRGVVPAV AVALVAGVGP APAVPTELVR RTVRAALEFP NGGAVGPAAL AAKGVVNHMA
      241 RLKASGLVAA AAVLIGLGAS AARQEPAPPP DTPVFPLAVP ALGERPLKLD IAFPSMADRP
      301 TGERPGHVHR SANFLVTAPT AVSARAVAAE AEFQRQQIGR LWLGKEPPPW AVRCEIVVRG
      361 APDRATGATT FDFHTDPNGR PVCRGAKMEL TGPLEGVLST ALPPEVTHAV LAHHFGKPLP
      421 RWAGAGLAVM SLGDEEQVQQ DQKCRELLNA GKGIRLRILF RKTEYPRDAM VLVAQGHSIV
      481 RFLLASEPAP GKAHRALLEF LRVGAEENTA ESWNKAAKDV YRFDSVDALE TAWLATLRKP
      541 PSAPKAPTPD DEEPGLIPPT RLPEARPVQK DETVVVNTRK FKLPVQIAPE RRTADRAVTL
      601 FVSRGKEPWY QAGMITPDKT AFTFEAPEDG LYWLAVAVIP KDQPDSSVTA LEPALKVIVD
      661 TVPPVVRVTK AERVDDRLRV SWSVTEANPG ALKVRWNVTG RESDWHDVPV ATNESSATFS
      721 PGSGAKAQIQ VVQVDAAGNE GRSAVVTVE
//