LOCUS VTR93555.1 749 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : Uncharacterized protein OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_0849 PE= 4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-2856 PROTEIN_ID VTR93555.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_41590" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|E8R2F4|E8R2F4_ISOPI ; ALN/Q_length_ratio=0.306 ; DESCRIPTION=Uncharacterized protein OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_0849 PE=4 SV=1 ; EVALUE=6e-40 ; Q/S_length_ratio=2.128" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DK84|L0DK84_SINAD ; ALN/Q_length_ratio=0.286 ; DESCRIPTION=Uncharacterized protein OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5098 PE=4 SV=1 ; EVALUE=2e-34 ; Q/S_length_ratio=2.774" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.352 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=3e-34 ; Q/S_length_ratio=1.767" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|M5TSN3|M5TSN3_9PLAN ; ALN/Q_length_ratio=0.283 ; DESCRIPTION=Uncharacterized protein OS=Rhodopirellula sallentina SM41 GN=RSSM_06470 PE=4 SV=1 ; EVALUE=6e-34 ; Q/S_length_ratio=1.800" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|A3ZUA1|A3ZUA1_9PLAN ; ALN/Q_length_ratio=0.292 ; DESCRIPTION=Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_21729 PE=4 SV=1 ; EVALUE=1e-33 ; Q/S_length_ratio=2.013" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|D2R4Q6|D2R4Q6_PIRSD ; ALN/Q_length_ratio=0.307 ; DESCRIPTION=Uncharacterized protein OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_2453 PE=4 SV=1 ; EVALUE=4e-33 ; Q/S_length_ratio=1.607" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0D7L2|L0D7L2_SINAD ; ALN/Q_length_ratio=0.374 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0185 PE=4 SV=1 ; EVALUE=6e-33 ; Q/S_length_ratio=1.495" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|M5T6U6|M5T6U6_9PLAN ; ALN/Q_length_ratio=0.284 ; DESCRIPTION=Uncharacterized protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_02895 PE=4 SV=1 ; EVALUE=2e-32 ; Q/S_length_ratio=1.661" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DQE6|L0DQE6_SINAD ; ALN/Q_length_ratio=0.335 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7079 PE=4 SV=1 ; EVALUE=6e-32 ; Q/S_length_ratio=0.786" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|A6CDR4|A6CDR4_9PLAN ; ALN/Q_length_ratio=0.290 ; DESCRIPTION=Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_08429 PE=4 SV=1 ; EVALUE=2e-31 ; Q/S_length_ratio=1.873" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DJM8|L0DJM8_SINAD ; ALN/Q_length_ratio=0.352 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4894 PE=4 SV=1 ; EVALUE=2e-31 ; Q/S_length_ratio=1.698" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.336 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=3e-31 ; Q/S_length_ratio=1.337" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|M5RX03|M5RX03_9PLAN ; ALN/Q_length_ratio=0.314 ; DESCRIPTION=Uncharacterized protein OS=Rhodopirellula europaea SH398 GN=RESH_05526 PE=4 SV=1 ; EVALUE=4e-31 ; Q/S_length_ratio=1.805" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|M2AVX0|M2AVX0_9PLAN ; ALN/Q_length_ratio=0.314 ; DESCRIPTION=Uncharacterized protein OS=Rhodopirellula europaea 6C GN=RE6C_05133 PE=4 SV=1 ; EVALUE=4e-31 ; Q/S_length_ratio=1.805" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L7C9W2|L7C9W2_RHOBT ; ALN/Q_length_ratio=0.314 ; DESCRIPTION=Uncharacterized protein OS=Rhodopirellula baltica SWK14 GN=RBSWK_05477 PE=4 SV=1 ; EVALUE=6e-31 ; Q/S_length_ratio=1.805" /note="Pfam_scan:hit_1 (37..103); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:69; HMM_Length:71; EVALUE:8.8e-06; BITSCORE: 25.2" /note="Pfam_scan:hit_2 (124..177); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54; EVALUE:3.9e-08; BITSCORE: 32.6" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MPGRVLELLH AATPDTPDAD LLARFVATRD EGAFADLVRA HGPAVYRVCR RLAPRHADDA 61 FQATFLVLAC RAGAVRKASS VGSWLIGAAG RVARQMTRRE RRSADVCATL ARPDDRNSGA 121 AELSATLDDE LSRLPDRLRA PLVSCFLYGR TQEQAATELD VSVRTLRRRL ERAKALLRLR 181 LERRGVVPAV AVALVAGVGP APAVPTELVR RTVRAALEFP NGGAVGPAAL AAKGVVNHMA 241 RLKASGLVAA AAVLIGLGAS AARQEPAPPP DTPVFPLAVP ALGERPLKLD IAFPSMADRP 301 TGERPGHVHR SANFLVTAPT AVSARAVAAE AEFQRQQIGR LWLGKEPPPW AVRCEIVVRG 361 APDRATGATT FDFHTDPNGR PVCRGAKMEL TGPLEGVLST ALPPEVTHAV LAHHFGKPLP 421 RWAGAGLAVM SLGDEEQVQQ DQKCRELLNA GKGIRLRILF RKTEYPRDAM VLVAQGHSIV 481 RFLLASEPAP GKAHRALLEF LRVGAEENTA ESWNKAAKDV YRFDSVDALE TAWLATLRKP 541 PSAPKAPTPD DEEPGLIPPT RLPEARPVQK DETVVVNTRK FKLPVQIAPE RRTADRAVTL 601 FVSRGKEPWY QAGMITPDKT AFTFEAPEDG LYWLAVAVIP KDQPDSSVTA LEPALKVIVD 661 TVPPVVRVTK AERVDDRLRV SWSVTEANPG ALKVRWNVTG RESDWHDVPV ATNESSATFS 721 PGSGAKAQIQ VVQVDAAGNE GRSAVVTVE //