LOCUS VTR93538.1 290 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dTDP-4-dehydrorhamnose reductase OS=
uncultured planctomycete GN=HGMM_F01A04C04 PE=4 SV=1:
RmlD_sub_bind protein.
ACCESSION LR593886-2839
PROTEIN_ID VTR93538.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_41760"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|H5S871|H5S871_9BACT ;
ALN/Q_length_ratio=0.969 ;
DESCRIPTION=dTDP-4-dehydrorhamnose reductase OS=uncultured
planctomycete GN=HGMM_F01A04C04 PE=4 SV=1 ; EVALUE=6e-85 ;
Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A6CFD4|A6CFD4_9PLAN ;
ALN/Q_length_ratio=0.979 ;
DESCRIPTION=dTDP-4-dehydrorhamnose reductase
OS=Planctomyces maris DSM 8797 GN=PM8797T_14574 PE=4 SV=1
; EVALUE=4e-83 ; Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D5MIZ2|D5MIZ2_9BACT ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=Spore coat
polysaccharide biosynthesis protein spsK OS=Candidatus
Methylomirabilis oxyfera GN=spsK PE=4 SV=1 ; EVALUE=4e-78
; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A3ZPE6|A3ZPE6_9PLAN ;
ALN/Q_length_ratio=0.976 ;
DESCRIPTION=dTDP-4-dehydrorhamnose reductase
OS=Blastopirellula marina DSM 3645 GN=DSM3645_28622 PE=4
SV=1 ; EVALUE=2e-74 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A081PB64|A0A081PB64_9BACL ;
ALN/Q_length_ratio=0.979 ;
DESCRIPTION=dTDP-4-dehydrorhamnose reductase
OS=Paenibacillus sp. MSt1 GN=ET33_00550 PE=4 SV=1 ;
EVALUE=9e-74 ; Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A062UU08|A0A062UU08_9EURY ;
ALN/Q_length_ratio=0.983 ;
DESCRIPTION=dTDP-4-dehydrorhamnose reductase OS=Candidatus
Methanoperedens nitroreducens GN=ANME2D_02536 PE=4 SV=1 ;
EVALUE=1e-72 ; Q/S_length_ratio=0.957"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|W8YGQ1|W8YGQ1_9BACL ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=Spore coat
polysaccharide biosynthesis protein SpsK OS=Paenibacillus
sp. P22 GN=spsK PE=4 SV=1 ; EVALUE=3e-72 ;
Q/S_length_ratio=0.967"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q6WNH6|Q6WNH6_GEOSE ;
ALN/Q_length_ratio=0.952 ;
DESCRIPTION=DTDP-4-dehydrorhamnose reductase
OS=Geobacillus stearothermophilus GN=rmlD PE=4 SV=1 ;
EVALUE=6e-71 ; Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D7D8B3|D7D8B3_STAHD ;
ALN/Q_length_ratio=0.966 ;
DESCRIPTION=dTDP-4-dehydrorhamnose reductase
OS=Staphylothermus hellenicus (strain DSM 12710 / JCM
10830 / BK20S6-10-b1 / P8) GN=Shell_0901 PE=4 SV=1 ;
EVALUE=1e-70 ; Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q7BG46|Q7BG46_GEOSE ;
ALN/Q_length_ratio=0.952 ;
DESCRIPTION=dTDP-4-dehydrorhamnose reductase
OS=Geobacillus stearothermophilus GN=rmlD PE=4 SV=1 ;
EVALUE=2e-70 ; Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A087LG21|A0A087LG21_GEOSE ;
ALN/Q_length_ratio=0.952 ;
DESCRIPTION=dTDP-4-dehydrorhamnose reductase
OS=Geobacillus stearothermophilus GN=ET31_05675 PE=4 SV=1
; EVALUE=2e-70 ; Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A1HMC7|A1HMC7_9FIRM ;
ALN/Q_length_ratio=0.941 ;
DESCRIPTION=dTDP-4-dehydrorhamnose reductase
OS=Thermosinus carboxydivorans Nor1 GN=TcarDRAFT_2660 PE=4
SV=1 ; EVALUE=2e-70 ; Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F8CX58|F8CX58_GEOTC ;
ALN/Q_length_ratio=0.952 ;
DESCRIPTION=dTDP-4-dehydrorhamnose reductase
OS=Geobacillus thermoglucosidasius (strain C56-YS93)
GN=Geoth_0304 PE=4 SV=1 ; EVALUE=3e-70 ;
Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|E3DYZ3|E3DYZ3_BACA1 ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=Putative
dTDP-4-dehydrorhamnose reductase OS=Bacillus atrophaeus
(strain 1942) GN=BATR1942_16825 PE=4 SV=1 ; EVALUE=1e-69 ;
Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A076X159|A0A076X159_BACAT ;
ALN/Q_length_ratio=0.952 ;
DESCRIPTION=dTDP-4-dehydrorhamnose reductase OS=Bacillus
atrophaeus subsp. globigii GN=rfbD PE=4 SV=1 ;
EVALUE=1e-69 ; Q/S_length_ratio=1.028"
/note="Pfam_scan:hit_1 (1..287);
Pfam:PF04321.12:RmlD_sub_bind;
Pfam_type:Domain;HMM_aln_Length:283; HMM_Length:287;
EVALUE:4e-89; BITSCORE: 298.3"
BEGIN
1 MKIAVLGAAG QLGRDLCPRL AALGEVVPLS RAEIDLARPG TIAPAIADLR PDIFVNCAAY
61 NLVDKAETEP EAAFAVNTWG VRELATACRT ANAKLVHFST DYVFGLDAAR TAPLNEDASP
121 GPVSVYGLSK LTGEFVVRAA APGNLVIRTC GLYGVWGSGG KGGNFVETML RIAKQGKPLR
181 VVNDQYCTPS YTADVADATV QLLERNATGL FHVTNSGACT WYQLAAEIFR QSGLHADLTP
241 ITSAEFGARA QRPPYSELST AKLTAHGIPT PRPWSEALAA YLNERQARNS
//