LOCUS VTR93531.1 410 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana nuclease subunit d : Nuclease SbcCD,
D subunit OS=gamma proteobacterium NOR5-3 GN=NOR53_2663
PE=4 SV=1: Metallophos protein.
ACCESSION LR593886-2832
PROTEIN_ID VTR93531.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_41830"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|B8KMM7|B8KMM7_9GAMM ;
ALN/Q_length_ratio=0.766 ; DESCRIPTION=Nuclease SbcCD, D
subunit OS=gamma proteobacterium NOR5-3 GN=NOR53_2663 PE=4
SV=1 ; EVALUE=2e-26 ; Q/S_length_ratio=1.076"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|I4ED17|I4ED17_9CHLR ;
ALN/Q_length_ratio=0.932 ; DESCRIPTION=Putative Nuclease
SbcCD, subunit D OS=Nitrolancea hollandica Lb
GN=NITHO_1310007 PE=4 SV=1 ; EVALUE=4e-26 ;
Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E0E234|E0E234_9FIRM ;
ALN/Q_length_ratio=0.866 ; DESCRIPTION=Exonuclease SbcCD,
D subunit OS=Peptostreptococcus stomatis DSM 17678 GN=sbcD
PE=4 SV=1 ; EVALUE=4e-24 ; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q0HHE6|Q0HHE6_SHESM ;
ALN/Q_length_ratio=0.624 ;
DESCRIPTION=Exodeoxyribonuclease I subunit D OS=Shewanella
sp. (strain MR-4) GN=Shewmr4_2450 PE=4 SV=1 ; EVALUE=6e-24
; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|G4SZI1|G4SZI1_META2 ;
ALN/Q_length_ratio=0.620 ; DESCRIPTION=Putative
exonuclease SbcD OS=Methylomicrobium alcaliphilum (strain
DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) GN=MEALZ_2750
PE=4 SV=1 ; EVALUE=9e-24 ; Q/S_length_ratio=1.076"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|R5ZLH9|R5ZLH9_9CLOT ;
ALN/Q_length_ratio=0.639 ; DESCRIPTION=Exonuclease SbcCD D
subunit OS=Clostridium sp. CAG:568 GN=BN713_00828 PE=4
SV=1 ; EVALUE=1e-23 ; Q/S_length_ratio=1.068"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Q0HTQ0|Q0HTQ0_SHESR ;
ALN/Q_length_ratio=0.622 ;
DESCRIPTION=Exodeoxyribonuclease I subunit D OS=Shewanella
sp. (strain MR-7) GN=Shewmr7_2520 PE=4 SV=1 ; EVALUE=1e-23
; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A090SLJ6|A0A090SLJ6_9VIBR ;
ALN/Q_length_ratio=0.776 ; DESCRIPTION=Exonuclease SbcD
OS=Vibrio variabilis GN=JCM19239_5798 PE=4 SV=1 ;
EVALUE=2e-23 ; Q/S_length_ratio=1.073"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0KYH0|A0KYH0_SHESA ;
ALN/Q_length_ratio=0.624 ;
DESCRIPTION=Exodeoxyribonuclease I subunit D OS=Shewanella
sp. (strain ANA-3) GN=Shewana3_2612 PE=4 SV=1 ;
EVALUE=3e-23 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A7VIT3|A7VIT3_9CLOT ;
ALN/Q_length_ratio=0.880 ; DESCRIPTION=Exonuclease SbcCD,
D subunit OS=Clostridium sp. L2-50 GN=sbcD PE=4 SV=1 ;
EVALUE=4e-23 ; Q/S_length_ratio=1.065"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|V1DH50|V1DH50_9GAMM ;
ALN/Q_length_ratio=0.624 ; DESCRIPTION=Exonuclease
OS=Shewanella decolorationis S12 GN=SHD_2846 PE=4 SV=1 ;
EVALUE=5e-23 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A098XRU7|A0A098XRU7_9CYAN ;
ALN/Q_length_ratio=0.788 ; DESCRIPTION=Exonuclease SbcD
OS=Tolypothrix bouteillei VB521301 GN=DA73_01685 PE=4 SV=1
; EVALUE=8e-23 ; Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|L8MUU2|L8MUU2_9CYAN ;
ALN/Q_length_ratio=0.634 ;
DESCRIPTION=Exodeoxyribonuclease I subunit D
OS=Pseudanabaena biceps PCC 7429 GN=Pse7429DRAFT_3429 PE=4
SV=1 ; EVALUE=1e-22 ; Q/S_length_ratio=1.062"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|N2AKW2|N2AKW2_9CLOT ;
ALN/Q_length_ratio=0.666 ; DESCRIPTION=Exonuclease SbcCD,
D subunit OS=Clostridium sp. ASF502 GN=C824_01417 PE=4
SV=1 ; EVALUE=1e-22 ; Q/S_length_ratio=1.085"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|R6R7A9|R6R7A9_9FIRM ;
ALN/Q_length_ratio=0.773 ; DESCRIPTION=Exonuclease SbcCD D
subunit OS=Faecalibacterium sp. CAG:82 GN=BN792_00387 PE=4
SV=1 ; EVALUE=2e-22 ; Q/S_length_ratio=1.070"
/note="Pfam_scan:hit_1 (1..242);
Pfam:PF00149.23:Metallophos;
Pfam_type:Domain;HMM_aln_Length:199; HMM_Length:200;
EVALUE:1.4e-14; BITSCORE: 53.9"
/note="GO_domain:GO:0004518"
/note="GO_domain:GO:0006259"
/note="Enzyme_Code:EC:3.1"
BEGIN
1 MRILHTADWH LGDRLGRIDR TDDLRKAVER VADYCKQENV DVLLVAGDLF SELARPDGLR
61 ETIRHWQSVF SPFLESGGTI LTLTGNHDNE NFCQTLVSAM SLASPTVGKP GETVPPGRLY
121 LAADPTFIRL EDRMGGFPVQ FVLMPYPTPH RFLRGETGLK YGSPEEKNAL LVAAWADALR
181 EIRAHPKYDL KAPSVLGAHV HVHGSTIGPS LFRITVEEDV VVEGAELPNQ FDYVALGHIH
241 KPQWLGAEHM RYCGSIERLD LGEQADQKGV ILVDIGPDGR NGEPVVLPLH ATPIYEVVVL
301 DPAEDIPRLR AEYPSANNDL VNLQIRYTAG KDQLEDVLRD LDKIFPRWYA RDWKETGALG
361 PTLVSPATGG GKGFGETVHE YLAQELIQHD EAERDAILKI ADGLLKEMEN
//