LOCUS VTR93513.1 681 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana radical sam domain-containing protein
: UPF0313 protein Sinac_2294 OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_2294 PE=3 SV=1: Radical_SAM_N: Radical_SAM: DUF3362
protein.
ACCESSION LR593886-2814
PROTEIN_ID VTR93513.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_42010"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5RSP5|M5RSP5_9PLAN ;
ALN/Q_length_ratio=0.956 ; DESCRIPTION=UPF0313 protein
RMSM_00699 OS=Rhodopirellula maiorica SM1 GN=RMSM_00699
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E8QYM0|E8QYM0_ISOPI ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=UPF0313 protein
Isop_0401 OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=Isop_0401 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.981"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A085WXU7|A0A085WXU7_9DELT ;
ALN/Q_length_ratio=0.905 ; DESCRIPTION=UPF0313 protein
DB31_0773 OS=Hyalangium minutum GN=DB31_0773 PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.071"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|U2SQG9|U2SQG9_9DELT ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=UPF0313 protein
A176_05014 OS=Myxococcus sp. (contaminant ex DSM 436)
GN=A176_05014 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q1D120|Q1D120_MYXXD ;
ALN/Q_length_ratio=0.931 ; DESCRIPTION=UPF0313 protein
MXAN_5510 OS=Myxococcus xanthus (strain DK 1622)
GN=MXAN_5510 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|S4XK39|S4XK39_SORCE ;
ALN/Q_length_ratio=0.865 ; DESCRIPTION=UPF0313 protein
SCE1572_46485 OS=Sorangium cellulosum So0157-2
GN=SCE1572_46485 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.051"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|S9P8N6|S9P8N6_9DELT ;
ALN/Q_length_ratio=0.916 ; DESCRIPTION=UPF0313 protein
D187_002991 OS=Cystobacter fuscus DSM 2262 GN=D187_002991
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.061"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A017TD31|A0A017TD31_9DELT ;
ALN/Q_length_ratio=0.906 ; DESCRIPTION=UPF0313 protein
CAP_1422 OS=Chondromyces apiculatus DSM 436 GN=CAP_1422
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|L7ULL0|L7ULL0_MYXSD ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=UPF0313 protein
MYSTI_06081 OS=Myxococcus stipitatus (strain DSM 14675 /
JCM 12634 / Mx s8) GN=MYSTI_06081 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A084STY1|A0A084STY1_9DELT ;
ALN/Q_length_ratio=0.919 ; DESCRIPTION=UPF0313 protein
Q664_19005 OS=Cystobacter violaceus Cb vi76 GN=Q664_19005
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.061"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D2QYA0|D2QYA0_PIRSD ;
ALN/Q_length_ratio=0.919 ; DESCRIPTION=UPF0313 protein
Psta_1639 OS=Pirellula staleyi (strain ATCC 27377 / DSM
6068 / ICPB 4128) GN=Psta_1639 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.887"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A085X4T1|A0A085X4T1_9DELT ;
ALN/Q_length_ratio=0.905 ; DESCRIPTION=UPF0313 protein
DB30_6550 OS=Enhygromyxa salina GN=DB30_6550 PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.071"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q08XF0|Q08XF0_STIAD ;
ALN/Q_length_ratio=0.903 ; DESCRIPTION=UPF0313 protein
STAUR_2893 OS=Stigmatella aurantiaca (strain DW4/3-1)
GN=STAUR_2893 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.071"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F8CKF6|F8CKF6_MYXFH ;
ALN/Q_length_ratio=0.930 ; DESCRIPTION=UPF0313 protein
LILAB_35040 OS=Myxococcus fulvus (strain ATCC BAA-855 /
HW-1) GN=LILAB_35040 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DBI9|L0DBI9_SINAD ;
ALN/Q_length_ratio=0.956 ; DESCRIPTION=UPF0313 protein
Sinac_2294 OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2294
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.993"
/note="Pfam_scan:hit_1 (21..329);
Pfam:PF08497.5:Radical_SAM_N;
Pfam_type:Family;HMM_aln_Length:301; HMM_Length:302;
EVALUE:3.1e-129; BITSCORE: 430.2"
/note="Pfam_scan:hit_2 (330..536);
Pfam:PF04055.16:Radical_SAM;
Pfam_type:Domain;HMM_aln_Length:163; HMM_Length:166;
EVALUE:3e-16; BITSCORE: 60.0"
/note="Pfam_scan:hit_3 (544..677); Pfam:PF11842.3:DUF3362;
Pfam_type:Family;HMM_aln_Length:124; HMM_Length:151;
EVALUE:6e-15; BITSCORE: 55.4"
/note="GO_domain:GO:0003674"
BEGIN
1 MSGTQSRISL PVWQERFAAP FAPTTAAEMA ARGWDFVDVV FVTGDAYVDH PSFAMAILHR
61 VLERAGFRVA ILSQPEWKTC EPWRQFGRPR LFFAISAGNM DSLINHYTAN KKVRNDDAYS
121 PGGKIGLRPD RATLPYCQRA REAFPGVPVI AGGVEASLRR LAHYDYWSDS VKRSILLDSK
181 ADLVVYGMGE QSILTIAQKL KVGGTLRDLR AMRGVAYAMG AKESEAWMAQ QQAADAADRS
241 ALSIIPSFEQ VRDDKWAFAE ATRLIHTNTN PFNAATLVQF HDRQAVVQNP PALPLSQQEI
301 DAVYDLPYNR RPHPSYTESV PAHEMIKDSV TILRGCFGGC TFCSITAHQG RIIQSRSSES
361 VMKEVQKLAS DPDFKGIISD IGGATANMYT MRCSRPEVEA KCKRLSCVHP GVCKLLGTDH
421 GPLIDLMREV RNVDGVRKVL VSSGIRMDLA QLSPEYVREL AEHHTGGRLK VAPEHTSPKV
481 LELMKKPSID NFGVFADQFR QASADAGKPK QQIIPYFIAS HPGSDLAEMI DLALYLKQNG
541 YRPDQIQDFI PAPFDIATCM YYAGLDPFTK KPVNTAKNLN DRKMQRALMQ FFKPENYFEV
601 REALIKAGRA ELIGGCNGLI PAQPPKEAIE ARRKQANTAA RNDHYHSVAN TAKGEPAGER
661 PTPPLVKNKG YRPGRKSQKR R
//