LOCUS VTR93506.1 321 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana family transcriptional regulator :
DNA-binding domain-containing protein, AraC-type OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_5492 PE=4 SV=1: AraC_N: HTH_18 protein.
ACCESSION LR593886-2807
PROTEIN_ID VTR93506.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_42080"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DLT7|L0DLT7_SINAD ;
ALN/Q_length_ratio=0.928 ; DESCRIPTION=DNA-binding
domain-containing protein, AraC-type OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_5492 PE=4 SV=1 ; EVALUE=1e-132 ;
Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|U2B8N5|U2B8N5_9PSED ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas sp. EGD-AK9
GN=N878_15410 PE=4 SV=1 ; EVALUE=4e-98 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|W6R3V0|W6R3V0_PSEPS ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas pseudoalcaligenes
CECT 5344 GN=BN5_2497 PE=4 SV=1 ; EVALUE=6e-97 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A061CYN6|A0A061CYN6_PSEPS ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas pseudoalcaligenes
GN=PPSAL_2467 PE=4 SV=1 ; EVALUE=6e-97 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A087FC97|A0A087FC97_9PSED ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas sp. 1-7
GN=JF55_09320 PE=4 SV=1 ; EVALUE=9e-97 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|U1SRT7|U1SRT7_PSEME ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas mendocina EGD-AQ5
GN=O203_17100 PE=4 SV=1 ; EVALUE=2e-96 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A028V3T4|A0A028V3T4_PSEPS ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas pseudoalcaligenes
AD6 GN=AU05_23175 PE=4 SV=1 ; EVALUE=3e-96 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A4XVM8|A4XVM8_PSEMY ;
ALN/Q_length_ratio=0.925 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Pseudomonas mendocina (strain
ymp) GN=Pmen_2638 PE=4 SV=1 ; EVALUE=3e-96 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|J7U779|J7U779_PSEME ;
ALN/Q_length_ratio=0.916 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas mendocina DLHK
GN=A471_03261 PE=4 SV=1 ; EVALUE=2e-95 ;
Q/S_length_ratio=1.092"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F4DQC6|F4DQC6_PSEMN ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas mendocina (strain
NK-01) GN=MDS_2068 PE=4 SV=1 ; EVALUE=3e-95 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A081X7H3|A0A081X7H3_PSEME ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas mendocina
GN=HN51_06545 PE=4 SV=1 ; EVALUE=5e-95 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A084UNP1|A0A084UNP1_PSEME ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas mendocina S5.2
GN=DW68_14435 PE=4 SV=1 ; EVALUE=5e-95 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A098SSS9|A0A098SSS9_9PSED ;
ALN/Q_length_ratio=0.907 ; DESCRIPTION=AraC family
transcriptional regulator OS=Pseudomonas lutea
GN=LT42_15435 PE=4 SV=1 ; EVALUE=6e-95 ;
Q/S_length_ratio=1.063"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|I7Z8M2|I7Z8M2_9GAMM ;
ALN/Q_length_ratio=0.885 ; DESCRIPTION=AraC-like
transcriptional regulator OS=Hydrocarboniphaga effusa
AP103 GN=WQQ_44170 PE=4 SV=1 ; EVALUE=3e-94 ;
Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|U2SNX2|U2SNX2_9DELT ;
ALN/Q_length_ratio=0.925 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Myxococcus sp. (contaminant ex
DSM 436) GN=A176_05774 PE=4 SV=1 ; EVALUE=3e-94 ;
Q/S_length_ratio=0.955"
/note="Pfam_scan:hit_1 (25..178); Pfam:PF06719.8:AraC_N;
Pfam_type:Family;HMM_aln_Length:154; HMM_Length:155;
EVALUE:4.4e-49; BITSCORE: 165.7"
/note="Pfam_scan:hit_2 (211..289); Pfam:PF12833.2:HTH_18;
Pfam_type:Domain;HMM_aln_Length:76; HMM_Length:81;
EVALUE:2.7e-21; BITSCORE: 75.4"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MATDELARLV AAIERHAPSD GVCRTAIPGL IIARLPEPTV PNALVVDPSL CIVAQGAKEV
61 FLAGEVYRYD PAHALLVSVD LPISARVVEA TPTRPCLAVR LSLDPSVVGE LLAECPDARS
121 PGPPARGVEV SPVEPQLLDA VGRLVSLLDS PHTLGPLAPL VLREITFRVL IGPQGARLRQ
181 IATTGAPAQQ IARAIRWLRD HFADPLPGEA LARQAQMSLS GFHQHFKAVT GLSPLQYQKQ
241 LRLQEARRLM LGEGLDAAGA ALRVGYESPS QFSREYRRLF GESPRRDVAA LKAKPQPSKQ
301 SELFRGTRGT HQSGPRAGAT G
//