LOCUS VTR93488.1 517 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana 30s ribosomal protein s1 : Ribosomal
protein S1 OS=Singulisphaera acidiphila (strain ATCC BAA-
1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5356 PE=
4 SV=1: S1: S1: S1 protein.
ACCESSION LR593886-2789
PROTEIN_ID VTR93488.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_42260"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DLH0|L0DLH0_SINAD ;
ALN/Q_length_ratio=0.735 ; DESCRIPTION=Ribosomal protein
S1 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 /
DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5356 PE=4 SV=1 ;
EVALUE=4e-96 ; Q/S_length_ratio=1.129"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E8QZK3|E8QZK3_ISOPI ;
ALN/Q_length_ratio=0.741 ; DESCRIPTION=30S ribosomal
protein S1 OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=Isop_1554 PE=3 SV=1 ; EVALUE=4e-93 ;
Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A6CB07|A6CB07_9PLAN ;
ALN/Q_length_ratio=0.723 ; DESCRIPTION=30S ribosomal
protein S1 OS=Planctomyces maris DSM 8797 GN=PM8797T_18856
PE=4 SV=1 ; EVALUE=9e-83 ; Q/S_length_ratio=0.904"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A3ZTD7|A3ZTD7_9PLAN ;
ALN/Q_length_ratio=0.990 ; DESCRIPTION=30S ribosomal
protein S1 OS=Blastopirellula marina DSM 3645
GN=DSM3645_19393 PE=3 SV=1 ; EVALUE=2e-81 ;
Q/S_length_ratio=0.965"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q7UWH7|Q7UWH7_RHOBA ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula baltica (strain SH1) GN=rpsA
PE=4 SV=1 ; EVALUE=2e-79 ; Q/S_length_ratio=0.923"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F2AS03|F2AS03_RHOBT ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula baltica WH47 GN=rpsA PE=4
SV=1 ; EVALUE=2e-79 ; Q/S_length_ratio=0.923"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M2AW65|M2AW65_9PLAN ;
ALN/Q_length_ratio=0.894 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula europaea 6C GN=RE6C_02335
PE=4 SV=1 ; EVALUE=2e-79 ; Q/S_length_ratio=0.923"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L7CNV6|L7CNV6_RHOBT ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula baltica SWK14 GN=RBSWK_00802
PE=4 SV=1 ; EVALUE=2e-79 ; Q/S_length_ratio=0.923"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|K5D3J8|K5D3J8_RHOBT ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula baltica SH28 GN=RBSH_03431
PE=4 SV=1 ; EVALUE=5e-79 ; Q/S_length_ratio=0.923"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5SI17|M5SI17_9PLAN ;
ALN/Q_length_ratio=0.894 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula europaea SH398 GN=RESH_03592
PE=4 SV=1 ; EVALUE=6e-79 ; Q/S_length_ratio=0.923"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|D2R2F1|D2R2F1_PIRSD ;
ALN/Q_length_ratio=0.712 ; DESCRIPTION=30S ribosomal
protein S1 OS=Pirellula staleyi (strain ATCC 27377 / DSM
6068 / ICPB 4128) GN=Psta_0370 PE=3 SV=1 ; EVALUE=2e-77 ;
Q/S_length_ratio=1.030"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|D5SVM5|D5SVM5_PLAL2 ;
ALN/Q_length_ratio=0.640 ; DESCRIPTION=RNA binding S1
domain protein OS=Planctomyces limnophilus (strain ATCC
43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_3572 PE=4 SV=1
; EVALUE=4e-76 ; Q/S_length_ratio=0.928"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5TAA1|M5TAA1_9PLAN ;
ALN/Q_length_ratio=0.932 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula sp. SWK7 GN=RRSWK_06744 PE=4
SV=1 ; EVALUE=7e-75 ; Q/S_length_ratio=0.920"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M5RCP2|M5RCP2_9PLAN ;
ALN/Q_length_ratio=0.700 ; DESCRIPTION=30S ribosomal
protein S1 OS=Rhodopirellula maiorica SM1 GN=RMSM_05925
PE=3 SV=1 ; EVALUE=1e-74 ; Q/S_length_ratio=1.062"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|X0SYY6|X0SYY6_9ZZZZ ;
ALN/Q_length_ratio=0.536 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L08021 (Fragment) OS=marine
sediment metagenome GN=S01H1_18409 PE=4 SV=1 ;
EVALUE=3e-70 ; Q/S_length_ratio=1.789"
/note="Pfam_scan:hit_1 (220..291); Pfam:PF00575.18:S1;
Pfam_type:Domain;HMM_aln_Length:69; HMM_Length:74;
EVALUE:6.1e-12; BITSCORE: 45.4"
/note="Pfam_scan:hit_2 (308..380); Pfam:PF00575.18:S1;
Pfam_type:Domain;HMM_aln_Length:71; HMM_Length:74;
EVALUE:7.8e-21; BITSCORE: 73.9"
/note="Pfam_scan:hit_3 (393..466); Pfam:PF00575.18:S1;
Pfam_type:Domain;HMM_aln_Length:72; HMM_Length:74;
EVALUE:3.9e-19; BITSCORE: 68.4"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0003735"
/note="GO_domain:GO:0042254"
/note="GO_domain:GO:0005840"
/note="GO_domain:GO:0006412"
BEGIN
1 MSTENTSPTP DQPTPPVATP AAPVTPASAA TPPAPGANAP KPGGPAPYAG KGPPRPGGPR
61 PGGPGGPNRG GPNRGGDRPN RSDKPYNPGG APQQLYVGST KPNARELDKL IEDELAQAMG
121 DFDVSKTVAA VETVQKPRAA GTVGGGKKTG VIVGVHGNDV FVEVPGGRSQ GVLPLQQFEG
181 RKPAVGEAVE FDIDHYDSAD GLLILTREGS TQVVHDWSQV TYGMIVEARV TGTNKNKTGL
241 TVEVAGIKGF LPASQLDLYR VENIEQFVNQ RIKVMVAEVN PEERNLIVSR RAVQEKEKQA
301 KAEEFWKNVA EGQVLKGIVR SIKPFGAFVD LGGADGLIPA SEFSWQRVND LSEFVKIGQQ
361 VEVKINRIDF DARKIGLSMK QLTVSPFEEY TKQVQAGARI TGKVTRIADF GAFVELTPGV
421 EGLIHVSELS TQRVRRVRDV IEEGQTVIVE VLSMDAATRR IALSLKKIAS EEEAAAEAAE
481 QAEHEADLKA AEEAMANRPV NPNLRGGIGS TIKFDKQ
//