LOCUS VTR93481.1 636 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma
factor : Basic secretory protein,F5/8 type C domain-containing
protein OS=Singulisphaera acidiphila (strain ATCC BAA-
1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5409 PE=
4 SV=1: Sigma70_r2: Sigma70_r4_2: BSP protein.
ACCESSION LR593886-2782
PROTEIN_ID VTR93481.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_42330"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DJX2|L0DJX2_SINAD ;
ALN/Q_length_ratio=0.517 ; DESCRIPTION=Basic secretory
protein,F5/8 type C domain-containing protein
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_5409 PE=4 SV=1 ;
EVALUE=4e-99 ; Q/S_length_ratio=1.797"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DGG0|L0DGG0_SINAD ;
ALN/Q_length_ratio=0.437 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_4264 PE=4 SV=1 ; EVALUE=1e-41 ;
Q/S_length_ratio=1.500"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0DM90|L0DM90_SINAD ;
ALN/Q_length_ratio=0.417 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_6419 PE=4 SV=1 ; EVALUE=2e-41 ;
Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ;
ALN/Q_length_ratio=0.336 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_5383 PE=4 SV=1 ; EVALUE=1e-39 ;
Q/S_length_ratio=1.994"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L0DCW6|L0DCW6_SINAD ;
ALN/Q_length_ratio=0.305 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_2795 PE=4 SV=1 ; EVALUE=2e-39 ;
Q/S_length_ratio=1.652"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L0D9E1|L0D9E1_SINAD ;
ALN/Q_length_ratio=0.327 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_0869 PE=4 SV=1 ; EVALUE=5e-38 ;
Q/S_length_ratio=1.320"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|L0DPR4|L0DPR4_SINAD ;
ALN/Q_length_ratio=0.469 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_6601 PE=4 SV=1 ; EVALUE=4e-37 ;
Q/S_length_ratio=1.050"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|L0DT29|L0DT29_SINAD ;
ALN/Q_length_ratio=0.393 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_7487 PE=4 SV=1 ; EVALUE=5e-37 ;
Q/S_length_ratio=1.277"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|L0DIU5|L0DIU5_SINAD ;
ALN/Q_length_ratio=0.417 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_4592 PE=4 SV=1 ; EVALUE=2e-36 ;
Q/S_length_ratio=1.112"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|L0DJM8|L0DJM8_SINAD ;
ALN/Q_length_ratio=0.410 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_4894 PE=4 SV=1 ; EVALUE=8e-36 ;
Q/S_length_ratio=1.442"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L0DFV7|L0DFV7_SINAD ;
ALN/Q_length_ratio=0.448 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_3442 PE=4 SV=1 ; EVALUE=1e-35 ;
Q/S_length_ratio=0.518"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|L0D6V6|L0D6V6_SINAD ;
ALN/Q_length_ratio=0.393 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_0102 PE=4 SV=1 ; EVALUE=1e-35 ;
Q/S_length_ratio=1.136"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|L0DKD8|L0DKD8_SINAD ;
ALN/Q_length_ratio=0.486 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_4965 PE=4 SV=1 ; EVALUE=2e-35 ;
Q/S_length_ratio=0.712"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|L0DDR3|L0DDR3_SINAD ;
ALN/Q_length_ratio=0.484 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_2497 PE=4 SV=1 ; EVALUE=4e-35 ;
Q/S_length_ratio=0.577"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|L0DQE6|L0DQE6_SINAD ;
ALN/Q_length_ratio=0.409 ; DESCRIPTION=RNA polymerase
sigma factor, sigma-70 family OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_7079 PE=4 SV=1 ; EVALUE=4e-33 ;
Q/S_length_ratio=0.667"
/note="Pfam_scan:hit_1 (39..107);
Pfam:PF04542.9:Sigma70_r2;
Pfam_type:Domain;HMM_aln_Length:69; HMM_Length:71;
EVALUE:3.4e-10; BITSCORE: 39.3"
/note="Pfam_scan:hit_2 (132..185);
Pfam:PF08281.7:Sigma70_r4_2;
Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54;
EVALUE:4.9e-11; BITSCORE: 41.9"
/note="Pfam_scan:hit_3 (452..630); Pfam:PF04450.7:BSP;
Pfam_type:Family;HMM_aln_Length:107; HMM_Length:205;
EVALUE:3.6e-12; BITSCORE: 46.2"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0000988"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MSVNRLNEPE VPAADSKLSD RELLQRFQAR NDEAAFAAVL QRHGPMVLRA CRRVLDRTED
61 AEDVFQATFL VLARKAGTVT WRESVGTWLH EAANRLARDV RRRRARRQVR EANRPPRESS
121 DALTEVSSRE LLTILDDEMA GLPEECRAPL LLCCLEGMSG DEAADHLGCS PSTLKRRLRQ
181 GRELLQARLA RRGIALSVAG LTTLLTGGIA AASVPAELAT MTTQAAVLCN AGVPLTPGLV
241 SPAAVSLMRR LVPTVSTKVK IAIGLLVFGG LCAIAVVSGK WNATSGKLVN EEIRAPGEAS
301 VTAASKPAKP SIPVTVETSL RTNAGQIRQF VFDGDPTTAF ASATNPGPAD HFTLVFDRAV
361 AVRSVDVRTG GVNGGWGLTG GRLEASADGA VFEPLAQFTG GTARGDAGGR KVIAVRVCPV
421 AQQHPLMISE IAIDSEPALA RFRHPIEFAV DTTAVPEMAK WAEHTTRVCE RFYPTVVDEL
481 AADGFRPPTL VPFIVRRDPA ALVAASRGRL IVSAGYFDAN PHDVGAVVHA TSYIVQAYHG
541 RATPDWLVQG VADYIRFFKF EPGAIGPPDP DTARYDGDSK ETAAFLAYLV DSYDPTIVRR
601 LNAALREGRY TDDLWVSLTG KSLRELGEEW HRSLRR
//