LOCUS VTR93456.1 102 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rna-binding protein : RNP-1 like RNA-
binding protein OS=Isosphaera pallida (strain ATCC 43644
/ DSM 9630 / IS1B) GN=Isop_0720 PE=4 SV=1: RRM_1 protein.
ACCESSION LR593886-2757
PROTEIN_ID VTR93456.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_42580"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E8R1A5|E8R1A5_ISOPI ;
ALN/Q_length_ratio=0.804 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=Isop_0720 PE=4 SV=1 ;
EVALUE=4e-27 ; Q/S_length_ratio=0.791"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E8R6M4|E8R6M4_ISOPI ;
ALN/Q_length_ratio=0.765 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=Isop_2358 PE=4 SV=1 ;
EVALUE=5e-27 ; Q/S_length_ratio=0.981"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D5SWS0|D5SWS0_PLAL2 ;
ALN/Q_length_ratio=0.775 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Planctomyces limnophilus (strain
ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_1587 PE=4
SV=1 ; EVALUE=5e-27 ; Q/S_length_ratio=0.699"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|S7VCV9|S7VCV9_9DELT ;
ALN/Q_length_ratio=0.824 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Desulfovibrio sp. X2 GN=dsx2_0195
PE=4 SV=1 ; EVALUE=2e-26 ; Q/S_length_ratio=1.109"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|C8X2X8|C8X2X8_DESRD ;
ALN/Q_length_ratio=0.765 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Desulfohalobium retbaense (strain
DSM 5692) GN=Dret_1489 PE=4 SV=1 ; EVALUE=6e-26 ;
Q/S_length_ratio=1.186"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L0DDX1|L0DDX1_SINAD ;
ALN/Q_length_ratio=0.775 ; DESCRIPTION=RRM
domain-containing RNA-binding protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_3164 PE=4 SV=1 ; EVALUE=8e-26 ;
Q/S_length_ratio=0.713"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|G2FH75|G2FH75_9GAMM ;
ALN/Q_length_ratio=0.863 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=endosymbiont of Tevnia jerichonana
(vent Tica) GN=TevJSym_at00580 PE=4 SV=1 ; EVALUE=3e-25 ;
Q/S_length_ratio=1.121"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|G2DGF3|G2DGF3_9GAMM ;
ALN/Q_length_ratio=0.863 ; DESCRIPTION=Uncharacterized
protein OS=endosymbiont of Riftia pachyptila (vent Ph05)
GN=Rifp1Sym_dl00160 PE=4 SV=1 ; EVALUE=3e-25 ;
Q/S_length_ratio=1.097"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|I2Q3W2|I2Q3W2_9DELT ;
ALN/Q_length_ratio=0.902 ; DESCRIPTION=RRM
domain-containing RNA-binding protein OS=Desulfovibrio sp.
U5L GN=DesU5LDRAFT_2825 PE=4 SV=1 ; EVALUE=3e-25 ;
Q/S_length_ratio=1.041"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|G7QBC0|G7QBC0_9DELT ;
ALN/Q_length_ratio=0.902 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Desulfovibrio sp. FW1012B
GN=DFW101_3344 PE=4 SV=1 ; EVALUE=3e-25 ;
Q/S_length_ratio=1.041"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|W4L845|W4L845_9DELT ;
ALN/Q_length_ratio=0.833 ; DESCRIPTION=RNA-binding protein
OS=Candidatus Entotheonella sp. TSY1 GN=ETSY1_37500 PE=4
SV=1 ; EVALUE=5e-25 ; Q/S_length_ratio=1.133"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K6FGB0|K6FGB0_9DELT ;
ALN/Q_length_ratio=0.922 ; DESCRIPTION=RRM
domain-containing RNA-binding protein OS=Desulfovibrio
magneticus str. Maddingley MBC34 GN=B193_3698 PE=4 SV=1 ;
EVALUE=9e-25 ; Q/S_length_ratio=1.052"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A059KHD6|A0A059KHD6_9BURK ;
ALN/Q_length_ratio=0.784 ; DESCRIPTION=RNA recognition
motif-containing protein OS=Sphaerotilus natans subsp.
natans DSM 6575 GN=X805_35580 PE=4 SV=1 ; EVALUE=1e-24 ;
Q/S_length_ratio=0.981"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|E1JSR4|E1JSR4_DESFR ;
ALN/Q_length_ratio=0.843 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Desulfovibrio fructosivorans JJ
GN=DesfrDRAFT_0653 PE=4 SV=1 ; EVALUE=1e-24 ;
Q/S_length_ratio=1.085"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|F3YX27|F3YX27_DESAF ;
ALN/Q_length_ratio=0.775 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Desulfovibrio africanus str. Walvis
Bay GN=Desaf_1072 PE=4 SV=1 ; EVALUE=3e-24 ;
Q/S_length_ratio=1.020"
/note="Pfam_scan:hit_1 (4..72); Pfam:PF00076.17:RRM_1;
Pfam_type:Domain;HMM_aln_Length:68; HMM_Length:70;
EVALUE:1.4e-20; BITSCORE: 72.7"
/note="GO_domain:GO:0003674"
BEGIN
1 MKKLYVGNLP FNATSDELRE MFSAYGRVLS ATICTDRETG NSRGFAFVEL AEGAEEAIQG
61 LHQAQFGGRS LTVNEAKPRE GGSSGGARGG SGAGRGGYSR SY
//