LOCUS       VTR93416.1               187 aa    PRT              BCT 03-FEB-2020
DEFINITION  Gemmata massiliana rna polymerase subunit sigma- partial
            : RNA polymerase sigma factor OS=Methylobacterium sp.
            (strain 4-46) GN=M446_0623 PE=3 SV=1: Sigma70_r2: Sigma70_r4_2
            protein.
ACCESSION   LR593886-2717
PROTEIN_ID  VTR93416.1
SOURCE      Gemmata massiliana
  ORGANISM  Gemmata massiliana
            Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
            Gemmata.
REFERENCE   1
  AUTHORS   
  CONSRTM   Science for Life Laboratories
  JOURNAL   Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
            MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
            Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES             Qualifiers
     source          /organism="Gemmata massiliana"
                     /chromosome="1"
                     /isolate="Soil9"
                     /mol_type="genomic DNA"
                     /isolation_source="soil"
                     /db_xref="taxon:1210884"
     protein         /locus_tag="SOIL9_42980"
                     /note="BLAST_uniprot:hit_1 ;
                     ACCESSION=tr|B0UPY5|B0UPY5_METS4 ;
                     ALN/Q_length_ratio=0.850 ; DESCRIPTION=RNA polymerase
                     sigma factor OS=Methylobacterium sp. (strain 4-46)
                     GN=M446_0623 PE=3 SV=1 ; EVALUE=6e-07 ;
                     Q/S_length_ratio=0.748"
                     /note="BLAST_uniprot:hit_2 ;
                     ACCESSION=tr|J2LUB4|J2LUB4_9BURK ;
                     ALN/Q_length_ratio=0.765 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Herbaspirillum sp. CF444
                     GN=PMI16_02141 PE=4 SV=1 ; EVALUE=9e-07 ;
                     Q/S_length_ratio=0.820"
                     /note="BLAST_uniprot:hit_3 ;
                     ACCESSION=tr|W4LC91|W4LC91_9DELT ;
                     ALN/Q_length_ratio=0.861 ; DESCRIPTION=RNA polymerase
                     sigma factor OS=Candidatus Entotheonella sp. TSY1
                     GN=ETSY1_31120 PE=3 SV=1 ; EVALUE=3e-06 ;
                     Q/S_length_ratio=0.886"
                     /note="Pfam_scan:hit_1 (23..94);
                     Pfam:PF04542.9:Sigma70_r2;
                     Pfam_type:Domain;HMM_aln_Length:44; HMM_Length:71;
                     EVALUE:3.1e-05; BITSCORE: 23.4"
                     /note="Pfam_scan:hit_2 (120..177);
                     Pfam:PF08281.7:Sigma70_r4_2;
                     Pfam_type:Domain;HMM_aln_Length:47; HMM_Length:54;
                     EVALUE:7.9e-05; BITSCORE: 22.0"
                     /note="GO_domain:GO:0003677"
                     /note="GO_domain:GO:0001071"
                     /note="GO_domain:GO:0000988"
                     /note="GO_domain:GO:0034641"
                     /note="GO_domain:GO:0009058"
                     /note="GO_domain:GO:0043234"
                     /note="GO_domain:GO:0005622"
BEGIN
        1 MDAVPQGRAA PVPAAVLPDA LGSWLVSCRG TLFTMLVCRG YSHASADDAV QDALVRALQW
       61 IAAGRFAAIT DPLAWLRVVA LNAARTNAPR RHLRPLGEGR ASAARPFDAF DGADETRARL
      121 GAVRVVLDGL PAPLGAVFTY CALEGHTRRA AARHFQLPLG TIMSAVRRAQ TAVHRALGEG
      181 RAGTKTE
//