LOCUS VTR93406.1 82 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana transcriptional regulator : Transcriptional
Regulator, XRE family protein OS=[Oscillatoria] sp. PCC
6506 GN=OSCI_340033 PE=4 SV=1: HTH_3 protein.
ACCESSION LR593886-2707
PROTEIN_ID VTR93406.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_43080"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D8FU71|D8FU71_9CYAN ;
ALN/Q_length_ratio=0.793 ; DESCRIPTION=Transcriptional
Regulator, XRE family protein OS=[Oscillatoria] sp. PCC
6506 GN=OSCI_340033 PE=4 SV=1 ; EVALUE=2e-14 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F5UCK9|F5UCK9_9CYAN ;
ALN/Q_length_ratio=0.854 ; DESCRIPTION=Helix-turn-helix
domain protein OS=Microcoleus vaginatus FGP-2
GN=MicvaDRAFT_3887 PE=4 SV=1 ; EVALUE=2e-13 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A014MHQ9|A0A014MHQ9_9BURK ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=Transcription
factor OS=Comamonas aquatica DA1877 GN=AX13_10655 PE=4
SV=1 ; EVALUE=3e-13 ; Q/S_length_ratio=0.911"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|K1UUQ8|K1UUQ8_9ZZZZ ;
ALN/Q_length_ratio=0.817 ; DESCRIPTION=Protein containing
Helix-turn-helix type 3 domain protein OS=human gut
metagenome GN=OBE_01386 PE=4 SV=1 ; EVALUE=1e-12 ;
Q/S_length_ratio=1.206"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|K9TI22|K9TI22_9CYAN ;
ALN/Q_length_ratio=0.841 ; DESCRIPTION=Putative
transcriptional regulator OS=Oscillatoria acuminata PCC
6304 GN=Oscil6304_2563 PE=4 SV=1 ; EVALUE=2e-12 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A099Y000|A0A099Y000_9FLAO ;
ALN/Q_length_ratio=0.780 ; DESCRIPTION=Transcriptional
regulator, XRE family OS=Polaribacter sp. Hel1_85
GN=PHEL85_0616 PE=4 SV=1 ; EVALUE=2e-12 ;
Q/S_length_ratio=1.093"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A090WQQ4|A0A090WQQ4_9FLAO ;
ALN/Q_length_ratio=0.780 ; DESCRIPTION=Transcriptional
regulator OS=Jejuia pallidilutea GN=JCM19301_2987 PE=4
SV=1 ; EVALUE=3e-12 ; Q/S_length_ratio=1.093"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|W1I7N1|W1I7N1_9BACT ;
ALN/Q_length_ratio=0.829 ; DESCRIPTION=Uncultured
bacterium extrachromosomal DNA RGI00957 OS=uncultured
bacterium PE=4 SV=1 ; EVALUE=4e-12 ;
Q/S_length_ratio=1.171"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|W0IYJ8|W0IYJ8_9BACT ;
ALN/Q_length_ratio=0.829 ; DESCRIPTION=DNA-binding protein
OS=Opitutaceae bacterium TAV5 GN=OPIT5_04300 PE=4 SV=1 ;
EVALUE=5e-12 ; Q/S_length_ratio=0.943"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A059U1J7|A0A059U1J7_9BACT ;
ALN/Q_length_ratio=0.915 ; DESCRIPTION=Transcriptional
regulator XRE family OS=uncultured bacterium PE=4 SV=1 ;
EVALUE=9e-12 ; Q/S_length_ratio=0.911"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|C0EPQ9|C0EPQ9_NEIFL ;
ALN/Q_length_ratio=0.829 ; DESCRIPTION=DNA-binding
helix-turn-helix protein OS=Neisseria flavescens
NRL30031/H210 GN=NEIFLAOT_01949 PE=4 SV=1 ; EVALUE=1e-11 ;
Q/S_length_ratio=0.976"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|N8VU11|N8VU11_9GAMM ;
ALN/Q_length_ratio=0.817 ; DESCRIPTION=Uncharacterized
protein OS=Acinetobacter sp. CIP 102129 GN=F973_00804 PE=4
SV=1 ; EVALUE=1e-11 ; Q/S_length_ratio=1.139"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|N8RNM7|N8RNM7_9GAMM ;
ALN/Q_length_ratio=0.744 ; DESCRIPTION=Uncharacterized
protein OS=Acinetobacter parvus DSM 16617 = CIP 108168
GN=F988_02760 PE=4 SV=1 ; EVALUE=4e-11 ;
Q/S_length_ratio=1.171"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|N8U810|N8U810_9GAMM ;
ALN/Q_length_ratio=0.744 ; DESCRIPTION=Uncharacterized
protein OS=Acinetobacter sp. CIP 102159 GN=F974_01111 PE=4
SV=1 ; EVALUE=4e-11 ; Q/S_length_ratio=1.171"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A086Y3N1|A0A086Y3N1_9RHOB ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=DNA-binding protein
OS=Paenirhodobacter enshiensis GN=CG50_11775 PE=4 SV=1 ;
EVALUE=4e-11 ; Q/S_length_ratio=0.976"
/note="Pfam_scan:hit_1 (13..67); Pfam:PF01381.17:HTH_3;
Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:55;
EVALUE:2.6e-14; BITSCORE: 52.7"
/note="GO_domain:GO:0003677"
BEGIN
1 MSEPLTTSFG HIVRHRREAL GLSQEELGAK TNLSRNYIGM VERGETNPTL LVLHGLARAL
61 STTMVSLIGE LEAGTDIPDP KR
//