LOCUS VTR93367.1 481 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana helix-turn-helix family protein : Uncharacterized
protein OS=Parvularcula bermudensis (strain ATCC BAA-594
/ HTCC2503 / KCTC 12087) GN=PB2503_12539 PE=4 SV=1: HTH_3:
DUF955 protein.
ACCESSION LR593886-2668
PROTEIN_ID VTR93367.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_43470"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E0TFI8|E0TFI8_PARBH ;
ALN/Q_length_ratio=1.004 ; DESCRIPTION=Uncharacterized
protein OS=Parvularcula bermudensis (strain ATCC BAA-594 /
HTCC2503 / KCTC 12087) GN=PB2503_12539 PE=4 SV=1 ;
EVALUE=1e-117 ; Q/S_length_ratio=0.990"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A085Y841|A0A085Y841_9DELT ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Uncharacterized
protein OS=Sandaracinus amylolyticus GN=DB32_1697 PE=4
SV=1 ; EVALUE=1e-111 ; Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|J7QNY3|J7QNY3_METSZ ;
ALN/Q_length_ratio=0.906 ; DESCRIPTION=Uncharacterized
protein OS=Methylocystis sp. (strain SC2) GN=BN69_0159
PE=4 SV=1 ; EVALUE=1e-111 ; Q/S_length_ratio=1.101"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A085QVV1|A0A085QVV1_VIBCL ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Helix-turn-helix
family protein OS=Vibrio cholerae GN=DN34_2389 PE=4 SV=1 ;
EVALUE=1e-104 ; Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|K5P5G6|K5P5G6_VIBCL ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Helix-turn-helix
family protein OS=Vibrio cholerae HE-46 GN=VCHE46_0773
PE=4 SV=1 ; EVALUE=1e-104 ; Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F9ATG4|F9ATG4_VIBCL ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Helix-turn-helix
family protein OS=Vibrio cholerae HE39 GN=VCHE39_1698 PE=4
SV=1 ; EVALUE=1e-104 ; Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|C9P6B5|C9P6B5_VIBME ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Putative
uncharacterized protein OS=Vibrio metschnikovii CIP 69.14
GN=VIB_001845 PE=4 SV=1 ; EVALUE=1e-104 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|K5PRQ7|K5PRQ7_VIBCL ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Helix-turn-helix
family protein OS=Vibrio cholerae HE-40 GN=VCHE40_0771
PE=4 SV=1 ; EVALUE=1e-104 ; Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A075MVV5|A0A075MVV5_9ARCH ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Putative
transcription factor, MBF1 like protein OS=Candidatus
Nitrososphaera evergladensis SR1 GN=NTE_03357 PE=4 SV=1 ;
EVALUE=1e-100 ; Q/S_length_ratio=0.984"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|X1Q5E6|X1Q5E6_9ZZZZ ;
ALN/Q_length_ratio=0.326 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S06H3_S16987 (Fragment) OS=marine
sediment metagenome GN=S06H3_49846 PE=4 SV=1 ;
EVALUE=3e-29 ; Q/S_length_ratio=3.064"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|C8XKU4|C8XKU4_NAKMY ;
ALN/Q_length_ratio=0.289 ; DESCRIPTION=Helix-turn-helix
domain protein OS=Nakamurella multipartita (strain ATCC
700099 / DSM 44233 / JCM 9543 / Y-104) GN=Namu_4466 PE=4
SV=1 ; EVALUE=9e-26 ; Q/S_length_ratio=3.317"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K9UDD3|K9UDD3_9CHRO ;
ALN/Q_length_ratio=0.297 ; DESCRIPTION=Helix-turn-helix
protein OS=Chamaesiphon minutus PCC 6605 GN=Cha6605_1211
PE=4 SV=1 ; EVALUE=2e-25 ; Q/S_length_ratio=3.250"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|R4YW51|R4YW51_9ACTN ;
ALN/Q_length_ratio=0.293 ; DESCRIPTION=Uncharacterized
protein OS=Candidatus Microthrix parvicella RN1
GN=BN381_100010 PE=4 SV=1 ; EVALUE=4e-24 ;
Q/S_length_ratio=3.364"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A084EU45|A0A084EU45_SPHYA ;
ALN/Q_length_ratio=0.316 ; DESCRIPTION=Putative
transcription regulator containing HTH domain protein
OS=Sphingobium yanoikuyae GN=CP98_00165 PE=4 SV=1 ;
EVALUE=5e-23 ; Q/S_length_ratio=1.143"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|L8M5V7|L8M5V7_9CYAN ;
ALN/Q_length_ratio=0.295 ; DESCRIPTION=Helix-turn-helix
protein OS=Xenococcus sp. PCC 7305
GN=Xen7305DRAFT_00033410 PE=4 SV=1 ; EVALUE=3e-22 ;
Q/S_length_ratio=3.364"
/note="Pfam_scan:hit_1 (82..136); Pfam:PF01381.17:HTH_3;
Pfam_type:Domain;HMM_aln_Length:49; HMM_Length:55;
EVALUE:1e-07; BITSCORE: 31.6"
/note="Pfam_scan:hit_2 (288..423); Pfam:PF06114.8:DUF955;
Pfam_type:Family;HMM_aln_Length:93; HMM_Length:122;
EVALUE:9.7e-07; BITSCORE: 28.5"
/note="GO_domain:GO:0003677"
BEGIN
1 MIKNERQYRI TKAEAEKFQG SLDGWNPMPP EGIDPIIHAA QKSALESQLG DLRRAVDEYE
61 ALRAGRHSVL EVESFEGLAD ALVRARIAIG LSQKELADRL GVKEQQIQKY EATGYSGASL
121 ARMTEVVHAL GVNVRKEVFL PPKPDARDAL IRGLADIGFD RKFIERRLLP NEDPVEKGKR
181 ASGDDGFVFR AATRAGRILG VAPAALLDPE PLAGNRLLAA TKFKVPAGAN EQRLTAYTFY
241 AHYLALLMLE ATAHLPTKPI PTGAKAVRAA IVGRYGNTDF DSVVRYIWDH GVPVLPLDDP
301 GAFHGACWRA NGRNVIALKR RTRFPARWVQ LGLHEFCHAG EEPDRPDFSV VEDSETPDAR
361 RESKEEKRAN RFAAEVILDG RAFELAQKCM DEANGRIDWL KRVVPDVAED AGVPVDGLAE
421 YIAYRLTEQG ENWWGTATNL QDGSSNPWRV ARDIALEKVD LTKLNPTDRE LLSLALMEME
481 D
//