LOCUS VTR93362.1 325 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana phage integrase : Phage integrase OS=
Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB
14124 / VKM B-2133 / 20Z) GN=MEALZ_p0088 PE=4 SV=1: Phage_int_SAM_1:
Phage_integrase protein.
ACCESSION LR593886-2663
PROTEIN_ID VTR93362.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_43520"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|G4T4N7|G4T4N7_META2 ;
ALN/Q_length_ratio=0.902 ; DESCRIPTION=Phage integrase
OS=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB
14124 / VKM B-2133 / 20Z) GN=MEALZ_p0088 PE=4 SV=1 ;
EVALUE=7e-41 ; Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A0A4RL29|A0A0A4RL29_BURPE ;
ALN/Q_length_ratio=0.877 ; DESCRIPTION=Uncharacterized
protein OS=Burkholderia pseudomallei MSHR4303 GN=X882_561
PE=4 SV=1 ; EVALUE=4e-38 ; Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A0A5B8C0|A0A0A5B8C0_9BURK ;
ALN/Q_length_ratio=0.877 ; DESCRIPTION=Uncharacterized
protein OS=Burkholderia sp. MSHR44 GN=Y036_2887 PE=4 SV=1
; EVALUE=9e-38 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A095LKF3|A0A095LKF3_BURPE ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Uncharacterized
protein OS=Burkholderia pseudomallei GN=DP62_489 PE=4 SV=1
; EVALUE=1e-37 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|F3K8K4|F3K8K4_PSESZ ;
ALN/Q_length_ratio=0.895 ; DESCRIPTION=Integrase
OS=Pseudomonas syringae pv. tabaci str. ATCC 11528
GN=C1E_0226360 PE=4 SV=1 ; EVALUE=2e-37 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A0A3P780|A0A0A3P780_BURPE ;
ALN/Q_length_ratio=0.877 ; DESCRIPTION=Uncharacterized
protein OS=Burkholderia pseudomallei MSHR5609 GN=X949_236
PE=4 SV=1 ; EVALUE=3e-37 ; Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|S6B9C8|S6B9C8_9PROT ;
ALN/Q_length_ratio=0.892 ; DESCRIPTION=Site-specific
recombinase XerD OS=Sulfuricella denitrificans skB26
GN=SCD_n03123 PE=4 SV=1 ; EVALUE=3e-37 ;
Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A097VLM1|A0A097VLM1_BURPE ;
ALN/Q_length_ratio=0.877 ; DESCRIPTION=Uncharacterized
protein OS=Burkholderia pseudomallei MSHR1153 GN=Y603_1911
PE=4 SV=1 ; EVALUE=3e-37 ; Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q2Y593|Q2Y593_NITMU ;
ALN/Q_length_ratio=0.886 ; DESCRIPTION=Phage integrase
OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB
11849) GN=Nmul_B2807 PE=4 SV=1 ; EVALUE=4e-37 ;
Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F0TD52|F0TD52_9PROT ;
ALN/Q_length_ratio=0.886 ; DESCRIPTION=Integrase family
protein OS=Nitrosomonas sp. AL212 GN=NAL212_0096 PE=4 SV=1
; EVALUE=8e-37 ; Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|L7GSK3|L7GSK3_PSESX ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=Phage integrase
family site specific recombinase OS=Pseudomonas syringae
BRIP39023 GN=A988_21447 PE=4 SV=1 ; EVALUE=2e-36 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A0A5BG78|A0A0A5BG78_BURPE ;
ALN/Q_length_ratio=0.877 ; DESCRIPTION=Uncharacterized
protein OS=Burkholderia pseudomallei MSHR2138 GN=Y043_309
PE=4 SV=1 ; EVALUE=3e-36 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A0A5CXN3|A0A0A5CXN3_BURPE ;
ALN/Q_length_ratio=0.877 ; DESCRIPTION=Uncharacterized
protein OS=Burkholderia pseudomallei MSHR3709 GN=Y600_5919
PE=4 SV=1 ; EVALUE=3e-36 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|Q48B24|Q48B24_PSE14 ;
ALN/Q_length_ratio=0.895 ; DESCRIPTION=Site-specific
recombinase, phage integrase family OS=Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
GN=PSPPH_B0017 PE=4 SV=1 ; EVALUE=4e-36 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q4ZWB4|Q4ZWB4_PSEU2 ;
ALN/Q_length_ratio=0.978 ; DESCRIPTION=Phage
integrase:Phage integrase, N-terminal SAM-like protein
OS=Pseudomonas syringae pv. syringae (strain B728a)
GN=Psyr_1508 PE=4 SV=1 ; EVALUE=9e-36 ;
Q/S_length_ratio=1.019"
/note="Pfam_scan:hit_1 (29..108);
Pfam:PF02899.12:Phage_int_SAM_1;
Pfam_type:Domain;HMM_aln_Length:74; HMM_Length:84;
EVALUE:1.8e-11; BITSCORE: 44.0"
/note="Pfam_scan:hit_2 (132..314);
Pfam:PF00589.17:Phage_integrase;
Pfam_type:Family;HMM_aln_Length:167; HMM_Length:173;
EVALUE:1.5e-27; BITSCORE: 96.3"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MTQPPALPLN PGSLPIVNDL RSQLTEAVEA WRSRSPSAET RSGYTRDLNQ FLRHVGIAEG
61 AWDELPRIRP GHVSAWRDHL LAAGQTNTSI GRKLSVIRSL FGYLRAYGYA RANPADTTFV
121 AAPPVPRDGK TVGLEPEECR LLLDAPLSNT PEGVRDRALL AVFAFTGCRV GEVCRLRVED
181 YKASGGHKVL EVRGKGGKER RVALHPEAFE RLDAWLDAGM LRGASGALFR PVRAARGHGA
241 HGFRGEPLSR RAVQLLVERY VKRLKLDPNV TVHSFRVTAL TTARERGADI IDLQDFAGHA
301 DPRTTLGYIR NRDRLSRSPA YVLKY
//