LOCUS VTR93357.1 305 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Plasmid encoded RepA protein OS=Haliscomenobacter
hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 /
O) GN=Halhy_6707 PE=4 SV=1: RepA_C protein.
ACCESSION LR593886-2658
PROTEIN_ID VTR93357.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_43570"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|F4L814|F4L814_HALH1 ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=Plasmid encoded
RepA protein OS=Haliscomenobacter hydrossis (strain ATCC
27775 / DSM 1100 / LMG 10767 / O) GN=Halhy_6707 PE=4 SV=1
; EVALUE=2e-92 ; Q/S_length_ratio=0.962"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|T1C2S4|T1C2S4_9ZZZZ ;
ALN/Q_length_ratio=0.744 ; DESCRIPTION=Replication protein
(Fragment) OS=mine drainage metagenome GN=B1B_00042 PE=4
SV=1 ; EVALUE=4e-62 ; Q/S_length_ratio=1.338"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|V5SDM4|V5SDM4_9RHIZ ;
ALN/Q_length_ratio=0.849 ; DESCRIPTION=Pirin
OS=Hyphomicrobium nitrativorans NL23 GN=W911_12035 PE=4
SV=1 ; EVALUE=9e-60 ; Q/S_length_ratio=0.894"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|S6D1F6|S6D1F6_ACEPA ;
ALN/Q_length_ratio=0.902 ; DESCRIPTION=Plasmid encoded
RepA protein OS=Acetobacter pasteurianus 386B GN=repA PE=4
SV=1 ; EVALUE=3e-59 ; Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|T1DEP6|T1DEP6_GLUTH ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Plasmid replication
initiator OS=Gluconobacter thailandicus NBRC 3257
GN=NBRC3257_3207 PE=4 SV=1 ; EVALUE=4e-59 ;
Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M9MBF7|M9MBF7_GLUTH ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Plasmid replication
initiator OS=Gluconobacter thailandicus NBRC 3255
GN=NBRC3255_3098 PE=4 SV=1 ; EVALUE=4e-59 ;
Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|G2I8H4|G2I8H4_KOMMN ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Plasmid replication
initiator OS=Komagataeibacter medellinensis (strain NBRC
3288 / BCRC 11682 / LMG 1693 / Kondo 51) GN=GLX_30630 PE=4
SV=1 ; EVALUE=6e-59 ; Q/S_length_ratio=0.971"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A021X2T7|A0A021X2T7_9RHIZ ;
ALN/Q_length_ratio=0.941 ; DESCRIPTION=Plasmid
partitioning protein RepA OS=Shinella sp. DD12 GN=repA
PE=4 SV=1 ; EVALUE=1e-57 ; Q/S_length_ratio=0.822"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|E3I760|E3I760_RHOVT ;
ALN/Q_length_ratio=0.921 ; DESCRIPTION=Plasmid encoded
RepA protein OS=Rhodomicrobium vannielii (strain ATCC
17100 / ATH 3.1.1 / DSM 162 / LMG 4299) GN=Rvan_1456 PE=4
SV=1 ; EVALUE=2e-57 ; Q/S_length_ratio=0.869"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D8N3I9|D8N3I9_RALSL ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=Putative
replication protein A (RepA) OS=Ralstonia solanacearum
CMR15 GN=CMR15_p0045 PE=4 SV=1 ; EVALUE=7e-57 ;
Q/S_length_ratio=0.770"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q8PRH6|Q8PRH6_XANAC ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Replication protein
A OS=Xanthomonas axonopodis pv. citri (strain 306) GN=repA
PE=4 SV=1 ; EVALUE=5e-56 ; Q/S_length_ratio=0.827"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A098I6C0|A0A098I6C0_XANCI ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Putative
replication protein A OS=Xanthomonas citri pv. citri
GN=XAC3610_11560005 PE=4 SV=1 ; EVALUE=1e-55 ;
Q/S_length_ratio=0.748"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q3C006|Q3C006_XANC5 ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Putative
replication protein A OS=Xanthomonas campestris pv.
vesicatoria (strain 85-10) GN=XCVd0098 PE=4 SV=1 ;
EVALUE=1e-55 ; Q/S_length_ratio=0.748"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A098KHN8|A0A098KHN8_XANCI ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Putative
replication protein A OS=Xanthomonas citri pv. citri
GN=XAC3607_3520007 PE=4 SV=1 ; EVALUE=1e-55 ;
Q/S_length_ratio=0.748"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M4W6H8|M4W6H8_XANCI ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Plasmid replication
initiator protein OS=Xanthomonas citri subsp. citri
Aw12879 GN=repA PE=4 SV=1 ; EVALUE=1e-55 ;
Q/S_length_ratio=0.748"
/note="Pfam_scan:hit_1 (86..244); Pfam:PF04796.7:RepA_C;
Pfam_type:Family;HMM_aln_Length:159; HMM_Length:161;
EVALUE:2.1e-45; BITSCORE: 154.2"
BEGIN
1 MTGTPPTGLH LSPTQKKRLE AATAILGSRP ERIDFLHTVQ CQCGIPYGNP GDEVREWERK
61 QGLATLRMEA GSAYDPTTGA FVKLGLPYGE KPRLVLIHLA TEAMRTGSPV VDVEDSMTAF
121 ARALGIAVNG PHLRHLKDQL SRLASATVRM GMIEGGRAVQ VNTQIVSAFD LWYPTEPGQR
181 VLWPSTVRLS AEYFASLERH AVPLDRRAVG ALAGSALALD VYTWLAQRLH RVPAGRPQFI
241 PWAGVYDQFG QGYARVRDFR KRFLETLHQV HAVYPQARLS ADDKGLTLEH SPPPIAGKPD
301 RLLLG
//