LOCUS VTR93353.1 2518 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rhs repeat-associated core domain-containing
protein : RHS repeat-associated core domain protein OS=
Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_0291 PE=4 SV=1: RHS_repeat:
RHS_repeat: PT-HINT protein.
ACCESSION LR593886-2654
PROTEIN_ID VTR93353.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_43610"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L0DA66|L0DA66_SINAD ;
ALN/Q_length_ratio=0.268 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_1341 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.129"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0D7A8|L0D7A8_SINAD ;
ALN/Q_length_ratio=0.603 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_0717 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.488"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E8QWU3|E8QWU3_ISOPI ;
ALN/Q_length_ratio=0.434 ; DESCRIPTION=YD repeat protein
OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 /
IS1B) GN=Isop_2419 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.011"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0D5P0|L0D5P0_SINAD ;
ALN/Q_length_ratio=0.689 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_0291 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.162"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L0D9R6|L0D9R6_SINAD ;
ALN/Q_length_ratio=0.410 ; DESCRIPTION=RHS
repeat-associated core domain protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_1226 PE=4 SV=1 ; EVALUE=1e-150 ;
Q/S_length_ratio=1.104"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D5STB0|D5STB0_PLAL2 ;
ALN/Q_length_ratio=0.401 ; DESCRIPTION=AmoP
OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776
/ IFAM 1008 / 290) GN=Plim_1036 PE=4 SV=1 ; EVALUE=1e-143
; Q/S_length_ratio=1.338"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D5SST5|D5SST5_PLAL2 ;
ALN/Q_length_ratio=0.438 ; DESCRIPTION=YD repeat protein
OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776
/ IFAM 1008 / 290) GN=Plim_3067 PE=4 SV=1 ; EVALUE=1e-112
; Q/S_length_ratio=1.257"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D2QZZ5|D2QZZ5_PIRSD ;
ALN/Q_length_ratio=0.282 ; DESCRIPTION=YD repeat protein
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=Psta_3703 PE=4 SV=1 ; EVALUE=2e-88 ;
Q/S_length_ratio=1.233"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D5SQM4|D5SQM4_PLAL2 ;
ALN/Q_length_ratio=0.208 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_2663 PE=4 SV=1 ;
EVALUE=1e-79 ; Q/S_length_ratio=3.587"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D5SWT5|D5SWT5_PLAL2 ;
ALN/Q_length_ratio=0.213 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_1602 PE=4 SV=1 ;
EVALUE=4e-70 ; Q/S_length_ratio=3.344"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|W7V1U7|W7V1U7_RUMFL ;
ALN/Q_length_ratio=0.517 ; DESCRIPTION=Uncharacterized
protein OS=Ruminococcus flavefaciens 007c GN=RF007C_02940
PE=4 SV=1 ; EVALUE=1e-44 ; Q/S_length_ratio=0.771"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q1Q7C5|Q1Q7C5_9BACT ;
ALN/Q_length_ratio=0.271 ; DESCRIPTION=Similar to
wall-associated protein OS=Candidatus Kuenenia
stuttgartiensis GN=WapA PE=4 SV=1 ; EVALUE=2e-43 ;
Q/S_length_ratio=1.198"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D5SWT3|D5SWT3_PLAL2 ;
ALN/Q_length_ratio=0.141 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_1600 PE=4 SV=1 ;
EVALUE=6e-42 ; Q/S_length_ratio=4.148"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|B8FIJ1|B8FIJ1_DESAA ;
ALN/Q_length_ratio=0.208 ; DESCRIPTION=YD repeat protein
OS=Desulfatibacillum alkenivorans (strain AK-01)
GN=Dalk_2288 PE=4 SV=1 ; EVALUE=7e-42 ;
Q/S_length_ratio=1.545"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A090KF71|A0A090KF71_9BACT ;
ALN/Q_length_ratio=0.053 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=5e-41 ;
Q/S_length_ratio=10.761"
/note="Pfam_scan:hit_1 (1233..1273);
Pfam:PF05593.9:RHS_repeat;
Pfam_type:Repeat;HMM_aln_Length:32; HMM_Length:38;
EVALUE:5.5e-05; BITSCORE: 23.2"
/note="Pfam_scan:hit_2 (2022..2063);
Pfam:PF05593.9:RHS_repeat;
Pfam_type:Repeat;HMM_aln_Length:29; HMM_Length:38;
EVALUE:0.00016; BITSCORE: 21.7"
/note="Pfam_scan:hit_3 (2288..2420);
Pfam:PF07591.6:PT-HINT;
Pfam_type:Family;HMM_aln_Length:128; HMM_Length:130;
EVALUE:6.8e-25; BITSCORE: 87.4"
/note="GO_domain:GO:0051604"
BEGIN
1 MPIPNRTAPS EWLAANIVPV QGATRPEVPA PFVLSATDRR IPTSDPATTL VPDSTSAFRS
61 GLGDELGPIS GPVASLALWE YPASLILDPN PNGAGGAELV GPLTPAIPVV ESGGHVATDT
121 GSDLYPVAPS ASGPTSTPRS SAVALDAAPA PATGEVESSN ALAALTPAPT PTQTAPRVWV
181 EAVAPEDPVA NGVGGFRVWR DGTAGDLAVR YAISGSAAPG ADYAPLSGTV VITDGNCAAT
241 VVPEPLRVDS SSAAREVTLT LVPAPSYTPG GGWTGTTRLG ARSTASQPAP VDPSAPPAFA
301 GGGPAGLSSH PIRYSDGMVI YSTTDLVSDG FGQPWGVSRS WYNLSTYGNH TDFGNGWVDS
361 ERPYLFRVDL TGQVIVVAGE TPTYFSPSGG AYVPDYFTTD QLAYDATAGE FVLTNAGGDR
421 YRFCDFATSL PTEQRGRLKQ VTDRFGNTTA VTTWTSAGKP GEVQRSATVG GATVTESYLY
481 SYVSGGVNDG RVSSVVLRRR AGTGAWSTIR EAAYTYYDGV EAHGNATDLK TAVVKDGSGN
541 VLDTEYYRYY TGESGGYVHG LKYAFRGDSY ARLAAAFSTP ASATDTQVAP YADHYFEYDA
601 NRRATTEVAK GAGDGGTYGG QGTFTFSYTL ASAPSGVNAW AKKTVETLPD GNQNVVYVNT
661 ANEVLLSAFV DVATSTQWVT AYHYDSAGRL EWVAQPSAVI GYSDTYVDLF NFSLGTSSYL
721 RDAAGLFQVY SYFASTTATS STAGGVAGYL QNTSLRQGEL GTAVLQEQDQ YISRTDSGGT
781 TIYLAATETQ YRADNGTGAQ ATSYSYTWSG TGFAVQTLTT TYPVVTTSQN GSGTAVTETT
841 AFDAMGYSIW FKDTAGGLTY QAYDVPTGSV VKTITDVDTT QTSDFTALPS GWSTPSGGGL
901 HLKTVTQVDA LGRPTAITAP NGNVTYTVYD DPDFEVRVYE GWNSSTGRPT GPTQVYREDR
961 ANGYSETLVM SAAPATSGGA PTGAEAITGL QALSRTYVTV GGQVSYADSY FNLSGLTYST
1021 STSFGTQGTN FYRTTNGYDA KGRFARTVSA QGTIYRTVYD GLGRAVSEWV GLDDAPTSGA
1081 WSPTNTAGTD LVKVREYEYD NGGVGDSNLT KVTEYPGGGA AARVTQTWYD WRNRAVAVKY
1141 GVEASESTSV NRQLVYYTYD NLDQVTMTQV YDADTVTPTV SGGVPQAPAS TLLRAQDTVE
1201 YDELGRVFRT RTYSVNTSTG AVSTNSLATD VWYDARGLVL KQSAPNGLVQ KWAYDGAGRV
1261 TTAYTGDWGS DAGYADADDV VGDTVLTQTE YVYDPSGNVR QVTVRDRFHD ATGTGALGTP
1321 TTGIAARVSY AGYYYDLADR MVAAVDVGTN GGSSWTRPGT VPSRSATVLV TSTKYATDAV
1381 QVIKLTGSPT GGTFTLSFGG STTSALAYNA SAATVQTALA ALTSIGSGNV QVLAAAGGGW
1441 EVRFIGTKAS TYQSAITGSG AGLTGGSSPA VATSTIYGGG DAGAAAEVTD PAGRVTRTYT
1501 DALGRTTRSV ENFVDGVVSD TDDKTVGYAY NGAGATSVTA YLTGGGVQTT GYVYGVTVAT
1561 GSTIQSNDVV RLTQWADPTT GAPSSSQQQA VTLDALGEVL TTTDRNGSVH TFTYDVLGRV
1621 VSDTVTTLGA GVDGAVRRVE TGYSTTGEVQ SVTSYSAVTG GSIVNQVLRD YNGLGQLITE
1681 WQSHSGAVVT STTPKIQYAY NFNGSGTTNQ SRLTSITYPS GYVLTFNYSS GINTAISRLS
1741 SLSDPNGAVE SYDYLGLDTV VRRAHSGPNV DLSYIKRTGE SNGDAGDQYT GLDRFGRVVD
1801 RRWLNPTTGT ATDRFQYGYN QAGSRTYRDN LVNTALGEVY TYDALNQLTG YSRGTLNGTK
1861 TGITGTASRN QTWDYDAVGN WDSVTTNGTA QTRTANAQNE ITSVSGATTP TYDANGNMTK
1921 DETGQQYVYD AWNRLVTVKN SGGTTIKAYT YDGLSRRVTE TASGTTTDLF YSKDWQVLEE
1981 KVGSNTTNRY VWSPVYVDAM VLRDRDTNAD GTLDERLWTQ QDANGNATAL VDGSGAVVER
2041 YVYDPFGNVT VLDASWNVRA GGSSYAMVYL WQGLRRDTVT GIYHARNRDV SPTLGRPLQS
2101 DPLGYAAGDA NLYRWEGNSP ITHVDPTGLI QAPPPEAIAE GWSEERIAQW RREQRERSPV
2161 PTPRTDYFKE TSNFFAGWAD ALTFGGTNYI RDGFGYNDAV DKTTGTYGAG QVVGTVHGIA
2221 LIPANPCVIA PKLGQGLQLI QGIQAGSLAS SALTNAYQGN YASAALDALG AFGSLSSLLR
2281 ACFAAGTPIR TPEGSRPIED FRPGDVVLSR DEFDPSGPVE AKVIEEVFVR TAPVLDLRVV
2341 GQTIATTGEH PFFAKDRGWV AANTLERGEQ ILGLAGEWLR VEGVKGSGQI TTVYNFRVAD
2401 FHTYFVGTEN WEGGVWAHNA YVSVGGRNPP ISQRQAGHTD GTPGKSQFNP GVDVEGVVRM
2461 AWEAGRPIFD KNGKFIGNIF TFKNPIGTSP TGFPQNTIKV HWSPRDGIHG VPTSVGGV
//