LOCUS VTR93274.1 512 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Uncultured bacterium genome assembly
Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=
1: LRR_6: LRR_6: LRR_6: LRR_6 protein.
ACCESSION LR593886-2575
PROTEIN_ID VTR93274.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_44400"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A090KN24|A0A090KN24_9BACT ;
ALN/Q_length_ratio=0.852 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=9e-54 ;
Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|Q5EUH2|Q5EUH2_9PLAN ;
ALN/Q_length_ratio=0.660 ; DESCRIPTION=Putative regulatory
subunit (Fragment) OS=Gemmata sp. Wa1-1 PE=4 SV=1 ;
EVALUE=3e-50 ; Q/S_length_ratio=0.931"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A6C6U2|A6C6U2_9PLAN ;
ALN/Q_length_ratio=0.881 ; DESCRIPTION=Leucine-rich repeat
domain protein OS=Planctomyces maris DSM 8797
GN=PM8797T_24876 PE=4 SV=1 ; EVALUE=6e-40 ;
Q/S_length_ratio=1.034"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A6C938|A6C938_9PLAN ;
ALN/Q_length_ratio=0.721 ; DESCRIPTION=Leucine-rich repeat
domain protein OS=Planctomyces maris DSM 8797
GN=PM8797T_14711 PE=4 SV=1 ; EVALUE=5e-39 ;
Q/S_length_ratio=0.404"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D7T4Y4|D7T4Y4_VITVI ;
ALN/Q_length_ratio=0.611 ; DESCRIPTION=Putative
uncharacterized protein OS=Vitis vinifera
GN=VIT_11s0118g00480 PE=4 SV=1 ; EVALUE=7e-37 ;
Q/S_length_ratio=0.886"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B2LUQ9|B2LUQ9_MALDO ;
ALN/Q_length_ratio=0.584 ; DESCRIPTION=F-box-containing
protein 1 OS=Malus domestica PE=2 SV=1 ; EVALUE=1e-36 ;
Q/S_length_ratio=0.883"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|X0TGY3|X0TGY3_9ZZZZ ;
ALN/Q_length_ratio=0.500 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S00874 (Fragment) OS=marine
sediment metagenome GN=S01H1_25862 PE=4 SV=1 ;
EVALUE=2e-36 ; Q/S_length_ratio=1.809"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F0SP32|F0SP32_PLABD ;
ALN/Q_length_ratio=0.678 ; DESCRIPTION=Leucine-rich
repeat-containing protein OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=Plabr_3538 PE=4 SV=1 ; EVALUE=3e-36 ;
Q/S_length_ratio=1.135"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A6C325|A6C325_9PLAN ;
ALN/Q_length_ratio=0.818 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_09949
PE=4 SV=1 ; EVALUE=3e-36 ; Q/S_length_ratio=0.948"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A068TPI0|A0A068TPI0_COFCA ;
ALN/Q_length_ratio=0.668 ; DESCRIPTION=Coffea canephora
DH200=94 genomic scaffold, scaffold_2 OS=Coffea canephora
GN=GSCOC_T00022198001 PE=4 SV=1 ; EVALUE=7e-36 ;
Q/S_length_ratio=0.886"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|B8ARB9|B8ARB9_ORYSI ;
ALN/Q_length_ratio=0.611 ; DESCRIPTION=Putative
uncharacterized protein OS=Oryza sativa subsp. indica
GN=OsI_16540 PE=4 SV=1 ; EVALUE=1e-35 ;
Q/S_length_ratio=0.881"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q01I53|Q01I53_ORYSA ;
ALN/Q_length_ratio=0.611 ; DESCRIPTION=OSIGBa0112M24.4
protein OS=Oryza sativa GN=OSIGBa0112M24.4 PE=4 SV=1 ;
EVALUE=1e-35 ; Q/S_length_ratio=0.881"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5VVI8|M5VVI8_PRUPE ;
ALN/Q_length_ratio=0.619 ; DESCRIPTION=Uncharacterized
protein OS=Prunus persica GN=PRUPE_ppa003392mg PE=4 SV=1 ;
EVALUE=1e-35 ; Q/S_length_ratio=0.886"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|Q0JBY3|Q0JBY3_ORYSJ ;
ALN/Q_length_ratio=0.611 ; DESCRIPTION=Os04g0503500
protein OS=Oryza sativa subsp. japonica GN=Os04g0503500
PE=2 SV=1 ; EVALUE=2e-35 ; Q/S_length_ratio=0.881"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D8S9I0|D8S9I0_SELML ;
ALN/Q_length_ratio=0.721 ; DESCRIPTION=Putative
uncharacterized protein OS=Selaginella moellendorffii
GN=SELMODRAFT_162512 PE=4 SV=1 ; EVALUE=1e-34 ;
Q/S_length_ratio=0.886"
/note="Pfam_scan:hit_1 (216..239); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:22; HMM_Length:24;
EVALUE:0.04; BITSCORE: 13.9"
/note="Pfam_scan:hit_2 (240..262); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:21; HMM_Length:24;
EVALUE:2; BITSCORE: 8.7"
/note="Pfam_scan:hit_3 (288..311); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:21; HMM_Length:24;
EVALUE:0.26; BITSCORE: 11.4"
/note="Pfam_scan:hit_4 (360..383); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:22; HMM_Length:24;
EVALUE:0.13; BITSCORE: 12.4"
BEGIN
1 MVRLFVALFV LFALAGSALA APVPKAAQAP EPLPADVVKA WEKAGATVWW LSIEECKVGG
61 EFPYRAGNPG RAGEVPVLVV GKYRDRMFAE LPAPDVPFAL DLAPRHVPED GFADLTRFKQ
121 LRGLRIGWGG QEKWIGPALG RLSRLRALDL QFSGISDEAL KEVGQLKELR VLNLGRNSVS
181 PTDAGLKHLT GLDQLHTLSL ESAPVTEDGA RELAALTSLR VLHLNKTKMG DAGLKHLAAL
241 TRLETLGLGR TNVTGAGLCA LRPLTALTTL DLECAPLDRA AARELAGFKN LRELDLTLTG
301 LDDDGLAEIA RLPRLAALTL YHTKVTDTGV KALAGAHALE TLNVQGTTVT GETLDALRAC
361 KSLRVLELDD CPVTDTGAER IATLNALTHL RFDGPKVTDR GLKALAALTS LEELVLRNAA
421 LTDAGVRNVI ALQSLRKLVL YNVTLTDAQL HELTALRKLT HLSVIGTKVT HAGLAEFRKK
481 APDCKTFVAG IMAPVAPAGA HNPPVPVAPP RK
//