LOCUS VTR93272.1 509 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Uncultured bacterium genome assembly
Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=
1: LRR_6: LRR_6: LRR_6: LRR_6 protein.
ACCESSION LR593886-2573
PROTEIN_ID VTR93272.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_44420"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A090KN24|A0A090KN24_9BACT ;
ALN/Q_length_ratio=0.790 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=2e-58 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|Q5EUH2|Q5EUH2_9PLAN ;
ALN/Q_length_ratio=0.815 ; DESCRIPTION=Putative regulatory
subunit (Fragment) OS=Gemmata sp. Wa1-1 PE=4 SV=1 ;
EVALUE=1e-54 ; Q/S_length_ratio=0.925"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A6C6U2|A6C6U2_9PLAN ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Leucine-rich repeat
domain protein OS=Planctomyces maris DSM 8797
GN=PM8797T_24876 PE=4 SV=1 ; EVALUE=1e-40 ;
Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A4A1I1|A4A1I1_9PLAN ;
ALN/Q_length_ratio=0.678 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_04405 PE=4 SV=1 ; EVALUE=3e-39 ;
Q/S_length_ratio=1.192"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A6C3D3|A6C3D3_9PLAN ;
ALN/Q_length_ratio=0.637 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_26210
PE=4 SV=1 ; EVALUE=6e-39 ; Q/S_length_ratio=1.107"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A6C325|A6C325_9PLAN ;
ALN/Q_length_ratio=0.815 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_09949
PE=4 SV=1 ; EVALUE=7e-39 ; Q/S_length_ratio=0.943"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q5EUG5|Q5EUG5_9PLAN ;
ALN/Q_length_ratio=0.499 ; DESCRIPTION=Putative regulatory
subunit (Fragment) OS=Gemmata sp. Wa1-1 PE=4 SV=1 ;
EVALUE=1e-37 ; Q/S_length_ratio=1.266"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|X0TGY3|X0TGY3_9ZZZZ ;
ALN/Q_length_ratio=0.519 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S00874 (Fragment) OS=marine
sediment metagenome GN=S01H1_25862 PE=4 SV=1 ;
EVALUE=3e-37 ; Q/S_length_ratio=1.799"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D7T4Y4|D7T4Y4_VITVI ;
ALN/Q_length_ratio=0.784 ; DESCRIPTION=Putative
uncharacterized protein OS=Vitis vinifera
GN=VIT_11s0118g00480 PE=4 SV=1 ; EVALUE=2e-36 ;
Q/S_length_ratio=0.881"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D8S9I0|D8S9I0_SELML ;
ALN/Q_length_ratio=0.699 ; DESCRIPTION=Putative
uncharacterized protein OS=Selaginella moellendorffii
GN=SELMODRAFT_162512 PE=4 SV=1 ; EVALUE=2e-36 ;
Q/S_length_ratio=0.881"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F0SP32|F0SP32_PLABD ;
ALN/Q_length_ratio=0.697 ; DESCRIPTION=Leucine-rich
repeat-containing protein OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=Plabr_3538 PE=4 SV=1 ; EVALUE=3e-36 ;
Q/S_length_ratio=1.129"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A6C938|A6C938_9PLAN ;
ALN/Q_length_ratio=0.646 ; DESCRIPTION=Leucine-rich repeat
domain protein OS=Planctomyces maris DSM 8797
GN=PM8797T_14711 PE=4 SV=1 ; EVALUE=3e-36 ;
Q/S_length_ratio=0.402"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q5WW76|Q5WW76_LEGPL ;
ALN/Q_length_ratio=0.699 ; DESCRIPTION=Uncharacterized
protein OS=Legionella pneumophila (strain Lens) GN=lpl1579
PE=4 SV=1 ; EVALUE=4e-36 ; Q/S_length_ratio=1.097"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|C1EGP2|C1EGP2_MICSR ;
ALN/Q_length_ratio=0.680 ; DESCRIPTION=Uncharacterized
protein OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MICPUN_63943 PE=4 SV=1 ; EVALUE=6e-36 ;
Q/S_length_ratio=0.834"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A068TPI0|A0A068TPI0_COFCA ;
ALN/Q_length_ratio=0.749 ; DESCRIPTION=Coffea canephora
DH200=94 genomic scaffold, scaffold_2 OS=Coffea canephora
GN=GSCOC_T00022198001 PE=4 SV=1 ; EVALUE=6e-36 ;
Q/S_length_ratio=0.881"
/note="Pfam_scan:hit_1 (216..239); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:22; HMM_Length:24;
EVALUE:0.009; BITSCORE: 15.9"
/note="Pfam_scan:hit_2 (240..262); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:21; HMM_Length:24;
EVALUE:1.9; BITSCORE: 8.7"
/note="Pfam_scan:hit_3 (288..311); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:21; HMM_Length:24;
EVALUE:0.088; BITSCORE: 12.9"
/note="Pfam_scan:hit_4 (360..382); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:19; HMM_Length:24;
EVALUE:0.027; BITSCORE: 14.5"
BEGIN
1 MIRPTAALIA LVALATPLCA APVPKEAQAP KPLPEDVVKA WEKAGATVGR VSIEECQVEP
61 GSPVRTGNPG RDGEVPVLVV GKYRDRMFTE LPAPDVPFAL DLSACHVPED GFADLTRFGH
121 LQGLRIGRDG WEPWIGPALG RLSQLRSLDL HSSWITDEAL KDVGKLKGLR VLNLGVNYQT
181 LTDAGLKHLA GLGQLHTLSL RDAPITDAGV RELAALKSLR VLHLNWTNVG DAGLKHLAAL
241 TRLETLGLGR TNVTGAGLCA LRPLTALTTL DLECAPLDRA AARELAGFKN LRELDLTLTG
301 LTDEGLAEIA RLPRLAALTL YHTKVTDTGV KALGGAHALE ALNLRDTAVT GETLDALRAC
361 KSLRSLDLHG CPVTDTGGER IAVLSTLAYL HLDSSKVTDR GVKALSALTN LEELVLYNVA
421 ATDTGVRNLI ALQSLRTLVL LNVNLTDAGL RELTALKKLT RLSVFVTKVT DAGVAEFHKK
481 VPGCYATRDG FPPPVLVEKP RAPDAATGK
//